Atomistry » Chlorine » PDB 5aoa-5b1k » 5app
Atomistry »
  Chlorine »
    PDB 5aoa-5b1k »
      5app »

Chlorine in PDB 5app: Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors

Protein crystallography data

The structure of Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors, PDB code: 5app was solved by M.D.Hartmann, O.Ridderbusch, A.N.Lupas, B.Hernandez Alvarez, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.90 / 2.30
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 62.130, 35.860, 198.510, 90.00, 96.02, 90.00
R / Rfree (%) 22.5 / 25.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors (pdb code 5app). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors, PDB code: 5app:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 5app

Go back to Chlorine Binding Sites List in 5app
Chlorine binding site 1 out of 5 in the Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1232

b:44.8
occ:1.00
ND2 A:ASN142 3.0 45.2 1.0
ND2 C:ASN142 3.2 44.9 1.0
CB C:SER139 3.4 46.5 1.0
ND2 B:ASN142 3.5 45.2 1.0
CA C:SER139 3.5 47.6 1.0
CB A:SER139 3.5 43.2 1.0
CB B:SER139 3.6 43.5 1.0
CA B:SER139 3.6 43.5 1.0
CA A:SER139 3.7 43.0 1.0
CB A:ASN142 3.8 45.2 1.0
CG A:ASN142 3.9 46.2 1.0
CB C:ASN142 4.0 44.4 1.0
CB B:ASN142 4.0 44.2 1.0
CG C:ASN142 4.1 44.3 1.0
O C:SER139 4.2 47.2 1.0
CG B:ASN142 4.3 44.1 1.0
C C:SER139 4.4 50.2 1.0
O B:SER139 4.4 41.2 1.0
N C:SER139 4.4 45.9 1.0
C B:SER139 4.5 44.3 1.0
O A:SER139 4.6 44.2 1.0
N B:SER139 4.6 44.0 1.0
N A:SER139 4.6 42.2 1.0
C A:SER139 4.7 45.1 1.0
OG C:SER139 4.7 52.1 1.0
OG A:SER139 4.8 48.1 1.0
O A:ARG138 4.9 45.1 1.0
OG B:SER139 5.0 45.7 1.0

Chlorine binding site 2 out of 5 in 5app

Go back to Chlorine Binding Sites List in 5app
Chlorine binding site 2 out of 5 in the Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1233

b:44.8
occ:1.00
ND2 C:ASN156 2.9 53.4 1.0
ND2 A:ASN156 3.0 48.5 1.0
ND2 B:ASN156 3.1 52.2 1.0
CB A:ASN156 3.7 51.9 1.0
CB B:ASN156 3.7 54.5 1.0
CB C:ASN156 3.7 54.9 1.0
CG C:ASN156 3.7 54.5 1.0
CG A:ASN156 3.8 49.3 1.0
CG B:ASN156 3.9 52.7 1.0
CA A:ILE153 4.0 50.3 1.0
CG1 C:ILE153 4.0 55.0 1.0
CA B:ILE153 4.0 53.7 1.0
CG1 B:ILE153 4.1 54.2 1.0
CG1 A:ILE153 4.1 50.1 1.0
CG2 B:ILE153 4.3 54.5 1.0
CG2 A:ILE153 4.4 48.6 1.0
O B:ILE153 4.4 57.0 1.0
CB B:ILE153 4.4 54.5 1.0
CB A:ILE153 4.4 50.3 1.0
CA C:ILE153 4.4 54.3 1.0
CG2 C:ILE153 4.4 55.5 1.0
CB C:ILE153 4.5 54.1 1.0
O A:ILE153 4.6 55.4 1.0
C B:ILE153 4.7 56.0 1.0
C A:ILE153 4.8 54.1 1.0
N A:ILE153 4.9 52.4 1.0
O B:LYS152 4.9 58.1 1.0
OD1 C:ASN156 4.9 53.8 1.0
N B:ILE153 5.0 55.3 1.0
OD1 A:ASN156 5.0 51.5 1.0

Chlorine binding site 3 out of 5 in 5app

Go back to Chlorine Binding Sites List in 5app
Chlorine binding site 3 out of 5 in the Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1232

b:60.2
occ:1.00
ND2 B:ASN179 2.9 71.0 1.0
ND2 A:ASN179 3.5 64.8 1.0
CG B:ASN179 3.6 70.8 1.0
ND2 C:ASN179 3.7 71.7 1.0
CB C:ASN179 3.7 70.3 1.0
CB B:ASN179 3.7 71.5 1.0
CA C:ILE176 3.9 77.7 1.0
CG1 C:ILE176 4.0 75.8 1.0
CG C:ASN179 4.1 70.7 1.0
O C:ILE176 4.2 78.7 1.0
CB A:ASN179 4.2 65.1 1.0
CA B:ILE176 4.2 63.2 1.0
CG1 B:ILE176 4.2 62.7 1.0
CB C:ILE176 4.3 77.0 1.0
CG2 C:ILE176 4.3 77.5 1.0
CG A:ASN179 4.3 64.4 1.0
CG1 A:ILE176 4.4 66.8 1.0
C C:ILE176 4.5 79.4 1.0
O C:ASP175 4.6 77.6 1.0
CB B:ILE176 4.6 62.6 1.0
CG2 B:ILE176 4.7 62.6 1.0
OD1 B:ASN179 4.7 72.9 1.0
O B:ILE176 4.7 65.9 1.0
N C:ILE176 4.8 77.8 1.0
CA A:ILE176 4.9 67.5 1.0
CA C:ASN179 5.0 70.7 1.0

Chlorine binding site 4 out of 5 in 5app

Go back to Chlorine Binding Sites List in 5app
Chlorine binding site 4 out of 5 in the Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1232

b:44.2
occ:1.00
ND2 C:ASN149 3.2 47.7 1.0
ND2 A:ASN149 3.2 46.2 1.0
CB A:SER146 3.5 45.9 1.0
CA A:SER146 3.5 44.7 1.0
CB C:SER146 3.6 47.6 1.0
CB B:SER146 3.7 49.6 1.0
CA C:SER146 3.8 46.7 1.0
ND2 B:ASN149 3.8 43.7 1.0
CB A:ASN149 3.9 42.7 1.0
CA B:SER146 3.9 48.7 1.0
CB C:ASN149 3.9 45.9 1.0
CG C:ASN149 4.0 46.0 1.0
CG A:ASN149 4.1 41.7 1.0
O A:SER146 4.2 45.6 1.0
CB B:ASN149 4.4 43.4 1.0
C A:SER146 4.4 48.4 1.0
N A:SER146 4.5 42.2 1.0
O C:ARG145 4.6 46.1 1.0
CG B:ASN149 4.6 42.9 1.0
N C:SER146 4.6 45.1 1.0
O B:SER146 4.6 48.8 1.0
O C:SER146 4.7 48.2 1.0
C C:SER146 4.8 49.6 1.0
C B:SER146 4.8 49.7 1.0
N B:SER146 4.9 49.0 1.0
OG A:SER146 4.9 48.1 1.0
OG C:SER146 4.9 47.6 1.0
O A:ARG145 4.9 44.7 1.0
C C:ARG145 4.9 45.9 1.0

Chlorine binding site 5 out of 5 in 5app

Go back to Chlorine Binding Sites List in 5app
Chlorine binding site 5 out of 5 in the Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Actinobacillus Actinomycetemcomitans OMP100 Residues 133-198 Fused to GCN4 Adaptors within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1233

b:61.9
occ:1.00
ND2 B:ASN172 2.9 57.8 1.0
ND2 C:ASN172 2.9 63.4 1.0
ND2 A:ASN172 3.0 58.9 1.0
CB C:ASN172 3.4 66.5 1.0
CG1 C:VAL169 3.5 60.6 1.0
CG C:ASN172 3.6 64.7 1.0
CG2 C:VAL169 3.7 56.8 1.0
CA C:VAL169 3.7 59.8 1.0
CB A:ASN172 3.8 60.0 1.0
CB C:VAL169 3.8 58.8 1.0
CG B:ASN172 3.8 57.9 1.0
CB B:ASN172 3.9 61.2 1.0
CG A:ASN172 3.9 59.8 1.0
CG1 A:VAL169 4.1 65.4 1.0
CG2 B:VAL169 4.2 59.9 1.0
O C:VAL169 4.2 65.0 1.0
CG2 A:VAL169 4.3 64.1 1.0
CA B:VAL169 4.5 62.2 1.0
C C:VAL169 4.5 64.0 1.0
CA A:VAL169 4.5 63.6 1.0
CB A:VAL169 4.5 63.6 1.0
CB B:VAL169 4.7 60.1 1.0
CG1 B:VAL169 4.7 63.0 1.0
N C:VAL169 4.8 59.2 1.0
O C:ASP168 4.8 59.9 1.0
OD1 C:ASN172 4.8 65.2 1.0
CA C:ASN172 4.8 68.8 1.0
O A:VAL169 4.9 67.3 1.0
OD1 B:ASN172 4.9 54.8 1.0
O B:VAL169 5.0 67.7 1.0

Reference:

M.D.Hartmann, C.T.Mendler, J.Bassler, I.Karamichali, O.Ridderbusch, A.N.Lupas, B.Hernandez Alvarez. Alpha / Beta Coiled Coils. Elife V. 5 2016.
ISSN: ESSN 2050-084X
PubMed: 26771248
DOI: 10.7554/ELIFE.11861
Page generated: Fri Jul 26 05:23:01 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy