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Chlorine in PDB 5bn1: Structure of AXE2-W215I, An Acetyl Xylan Esterase From Geobacillus Stearothermophilus

Protein crystallography data

The structure of Structure of AXE2-W215I, An Acetyl Xylan Esterase From Geobacillus Stearothermophilus, PDB code: 5bn1 was solved by S.Lansky, O.Alalouf, Y.Shoham, G.Shoham, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.60
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 108.880, 108.880, 216.120, 90.00, 90.00, 90.00
R / Rfree (%) 14.4 / 16.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of AXE2-W215I, An Acetyl Xylan Esterase From Geobacillus Stearothermophilus (pdb code 5bn1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of AXE2-W215I, An Acetyl Xylan Esterase From Geobacillus Stearothermophilus, PDB code: 5bn1:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5bn1

Go back to Chlorine Binding Sites List in 5bn1
Chlorine binding site 1 out of 2 in the Structure of AXE2-W215I, An Acetyl Xylan Esterase From Geobacillus Stearothermophilus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of AXE2-W215I, An Acetyl Xylan Esterase From Geobacillus Stearothermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:21.2
occ:0.80
OG A:SER15 2.7 20.3 1.0
ND2 A:ASN92 3.0 13.6 1.0
N A:GLY63 3.0 14.9 1.0
O A:HOH596 3.1 43.5 1.0
N A:SER15 3.2 13.9 1.0
CB A:SER15 3.2 15.3 1.0
CA A:GLY63 3.6 16.1 1.0
OD1 A:ASN92 3.7 16.1 1.0
CB A:ASP14 3.7 13.7 1.0
O A:HOH491 3.7 23.9 1.0
CG A:ASN92 3.8 13.9 1.0
CA A:SER15 3.8 14.6 1.0
C A:SER62 4.0 13.7 1.0
CA A:SER62 4.0 16.0 0.3
OG A:SER62 4.1 18.8 0.7
CA A:SER62 4.1 16.6 0.7
CG A:ASP14 4.1 15.3 1.0
C A:ASP14 4.3 12.9 1.0
C A:GLY63 4.4 14.3 1.0
NE2 A:HIS194 4.4 18.3 1.0
CB A:SER62 4.5 17.0 0.3
CA A:ASP14 4.5 13.7 1.0
OD1 A:ASP14 4.5 14.8 1.0
N A:ASN64 4.6 14.5 1.0
OD2 A:ASP14 4.7 15.8 1.0
CB A:SER62 4.7 18.0 0.7
C A:SER15 4.9 14.4 1.0
O A:HOH488 5.0 36.6 1.0
N A:ILE16 5.0 13.8 1.0

Chlorine binding site 2 out of 2 in 5bn1

Go back to Chlorine Binding Sites List in 5bn1
Chlorine binding site 2 out of 2 in the Structure of AXE2-W215I, An Acetyl Xylan Esterase From Geobacillus Stearothermophilus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of AXE2-W215I, An Acetyl Xylan Esterase From Geobacillus Stearothermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:25.1
occ:1.00
OG B:SER15 2.7 23.8 1.0
ND2 B:ASN92 3.0 14.7 1.0
N B:GLY63 3.0 16.9 1.0
O B:HOH565 3.1 39.3 1.0
N B:SER15 3.2 13.0 1.0
CB B:SER15 3.2 17.5 1.0
CA B:GLY63 3.7 15.9 1.0
OD1 B:ASN92 3.7 17.3 1.0
O B:HOH485 3.7 24.6 1.0
CG B:ASN92 3.7 13.3 1.0
CB B:ASP14 3.7 13.7 1.0
CA B:SER15 3.8 14.2 1.0
C B:SER62 4.0 16.4 1.0
OG B:SER62 4.1 22.6 1.0
CA B:SER62 4.1 15.4 1.0
CG B:ASP14 4.1 16.0 1.0
C B:ASP14 4.3 11.3 1.0
NE2 B:HIS194 4.3 19.1 1.0
C B:GLY63 4.4 15.0 1.0
OD1 B:ASP14 4.5 15.1 1.0
CA B:ASP14 4.5 12.9 1.0
N B:ASN64 4.6 14.6 1.0
OD2 B:ASP14 4.7 16.7 1.0
CB B:SER62 4.8 19.1 1.0
C B:SER15 4.9 15.0 1.0
N B:ILE16 5.0 14.5 1.0

Reference:

S.Lansky, O.Alalouf, H.V.Solomon, A.Alhassid, L.Govada, N.E.Chayen, H.Belrahli, Y.Shoham, G.Shoham. A Unique Octameric Structure of AXE2, An Intracellular Acetyl-Xylooligosaccharide Esterase From Geobacillus Stearothermophilus To Be Published.
Page generated: Fri Jul 26 05:34:36 2024

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