Chlorine in PDB 5bp7: Crystal Structure of Sam-Dependent Methyltransferase From Geobacter Sulfurreducens in Complex with S-Adenosyl-L-Homocysteine

The structure of Crystal Structure of Sam-Dependent Methyltransferase From Geobacter Sulfurreducens in Complex with S-Adenosyl-L-Homocysteine, PDB code: 5bp7 was solved by J.Kutner, I.G.Shabalin, D.V.Mason, K.B.Handing, O.A.Gasiorowska, J.Bonanno, R.Seidel, S.C.Almo, W.Minor, New York Structural Genomicsresearch Consortium (Nysgrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.10
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	89.346, 110.189, 76.681, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 22.3

The binding sites of Chlorine atom in the Crystal Structure of Sam-Dependent Methyltransferase From Geobacter Sulfurreducens in Complex with S-Adenosyl-L-Homocysteine (pdb code 5bp7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Sam-Dependent Methyltransferase From Geobacter Sulfurreducens in Complex with S-Adenosyl-L-Homocysteine, PDB code: 5bp7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Sam-Dependent Methyltransferase From Geobacter Sulfurreducens in Complex with S-Adenosyl-L-Homocysteine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Sam-Dependent Methyltransferase From Geobacter Sulfurreducens in Complex with S-Adenosyl-L-Homocysteine within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl302 b:45.3 occ:1.00 O A:HOH456 3.1 43.3 1.0 N A:ARG40 3.1 33.1 1.0 NE A:ARG132 3.3 48.2 1.0 N A:GLY106 3.5 32.5 1.0 CA A:THR39 3.7 34.9 1.0 CA A:GLY106 3.8 32.6 1.0 NH2 A:ARG132 3.8 49.4 1.0 C A:THR39 3.9 33.8 1.0 CB A:ARG40 3.9 34.4 1.0 CG2 A:THR39 4.0 34.0 1.0 CZ A:ARG132 4.0 48.2 1.0 CA A:ARG40 4.0 33.1 1.0 CD A:ARG132 4.2 46.9 1.0 O A:ARG40 4.3 31.7 1.0 CB A:THR39 4.3 34.6 1.0 O A:GLY38 4.5 36.0 1.0 C A:ALA105 4.6 32.7 1.0 CG A:ARG132 4.6 44.6 1.0 C A:ARG40 4.6 32.2 1.0 OG1 A:THR39 4.8 36.3 1.0 N A:THR39 4.8 35.5 1.0 O A:LYS104 5.0 35.1 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Sam-Dependent Methyltransferase From Geobacter Sulfurreducens in Complex with S-Adenosyl-L-Homocysteine


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Sam-Dependent Methyltransferase From Geobacter Sulfurreducens in Complex with S-Adenosyl-L-Homocysteine within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl302 b:41.5 occ:1.00 NZ C:LYS25 3.1 37.0 1.0 OD1 C:ASP189 3.2 45.3 1.0 N C:ASP189 3.3 35.4 1.0 CA C:GLY192 3.5 29.9 1.0 CG C:LYS25 3.6 36.5 1.0 N C:GLY192 3.7 30.8 1.0 N C:THR22 3.8 37.0 1.0 CA C:ALA188 3.8 33.4 1.0 O C:PRO20 3.9 37.1 1.0 CG2 C:THR22 3.9 38.8 1.0 CG C:ASP189 4.0 43.6 1.0 CA C:ILE21 4.0 37.8 1.0 CE C:LYS25 4.0 37.2 1.0 C C:ALA188 4.0 34.3 1.0 OG1 C:THR22 4.1 37.9 1.0 CD C:LYS25 4.1 37.1 1.0 O C:ASP189 4.2 33.1 1.0 CB C:ALA188 4.3 33.5 1.0 CA C:ASP189 4.4 37.2 1.0 C C:ILE21 4.4 37.0 1.0 CB C:THR22 4.5 38.0 1.0 CG2 C:ILE21 4.5 39.9 1.0 CB C:LYS25 4.5 35.5 1.0 CB C:ILE21 4.5 39.0 1.0 OD2 C:ASP189 4.6 49.6 1.0 CB C:ASP189 4.6 40.4 1.0 C C:ASP189 4.7 35.1 1.0 O C:LEU187 4.7 33.2 1.0 O C:HOH401 4.7 37.7 1.0 CA C:THR22 4.7 37.3 1.0 C C:GLY192 4.7 29.6 1.0 C C:PRO20 4.8 35.3 1.0 C C:ASP191 4.9 32.1 1.0 N C:ILE21 4.9 36.2 1.0 N C:ALA188 4.9 32.6 1.0

J.Kutner, I.G.Shabalin, D.Mason, K.B.Handing, O.A.Gasiorowska, J.Bonanno, R.Seidel, S.C.Almo, W.Minor. Crystal Structure of Sam-Dependent Methyltransferase From Geobacter Sulfurreducens in Complex with S-Adenosyl-L-Homocysteine To Be Published.