Atomistry » Chlorine » PDB 5bou-5bve » 5bpm
Atomistry »
  Chlorine »
    PDB 5bou-5bve »
      5bpm »

Chlorine in PDB 5bpm: Crystal Structure of Unhydrolyzed Atp Bound Human HSP70 Nbd Double Mutant E268Q+R272K.

Protein crystallography data

The structure of Crystal Structure of Unhydrolyzed Atp Bound Human HSP70 Nbd Double Mutant E268Q+R272K., PDB code: 5bpm was solved by D.Narayanan, R.A.Engh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.08 / 1.83
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 46.466, 64.278, 144.860, 90.00, 90.00, 90.00
R / Rfree (%) 17.1 / 22.8

Other elements in 5bpm:

The structure of Crystal Structure of Unhydrolyzed Atp Bound Human HSP70 Nbd Double Mutant E268Q+R272K. also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Unhydrolyzed Atp Bound Human HSP70 Nbd Double Mutant E268Q+R272K. (pdb code 5bpm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Unhydrolyzed Atp Bound Human HSP70 Nbd Double Mutant E268Q+R272K., PDB code: 5bpm:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5bpm

Go back to Chlorine Binding Sites List in 5bpm
Chlorine binding site 1 out of 2 in the Crystal Structure of Unhydrolyzed Atp Bound Human HSP70 Nbd Double Mutant E268Q+R272K.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Unhydrolyzed Atp Bound Human HSP70 Nbd Double Mutant E268Q+R272K. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:21.1
occ:1.00
HZ2 A:LYS126 2.4 27.4 1.0
H A:ASP32 2.5 25.7 1.0
HB2 A:ASN31 2.6 20.7 1.0
HE22 A:GLN33 2.7 22.9 1.0
HB2 A:ASP32 2.9 17.6 1.0
HD2 A:LYS126 2.9 30.9 1.0
O A:HOH763 3.1 14.9 1.0
NZ A:LYS126 3.2 22.8 1.0
N A:ASP32 3.3 21.4 1.0
NE2 A:GLN33 3.5 19.1 1.0
HZ3 A:LYS126 3.5 27.4 1.0
CB A:ASN31 3.5 17.3 1.0
CB A:ASP32 3.6 14.7 1.0
HD11 A:ILE130 3.7 24.7 1.0
HG12 A:ILE130 3.7 26.8 1.0
HZ1 A:LYS126 3.7 27.4 1.0
CD A:LYS126 3.8 25.7 1.0
CG A:ASP32 3.8 36.3 1.0
O A:HOH731 3.8 42.0 1.0
CE A:LYS126 3.9 24.8 1.0
CG A:ASN31 3.9 22.4 1.0
HE3 A:LYS126 3.9 29.8 1.0
HE21 A:GLN33 4.0 22.9 1.0
CA A:ASP32 4.1 15.8 1.0
O A:HOH632 4.1 30.3 1.0
OE1 A:GLN33 4.1 27.7 1.0
H A:GLN33 4.1 20.2 1.0
O A:HOH725 4.1 16.1 1.0
HB3 A:ASN31 4.1 20.7 1.0
HD3 A:LYS126 4.2 30.9 1.0
HD22 A:ASN31 4.2 26.0 1.0
HG13 A:ILE130 4.2 26.8 1.0
OD1 A:ASP32 4.2 33.8 1.0
CD A:GLN33 4.2 27.0 1.0
OD2 A:ASP32 4.2 37.6 1.0
ND2 A:ASN31 4.2 21.6 1.0
CG1 A:ILE130 4.3 22.3 1.0
C A:ASN31 4.3 21.2 1.0
CA A:ASN31 4.3 17.0 1.0
CD1 A:ILE130 4.4 20.6 1.0
HA A:ASN31 4.4 20.4 1.0
OD1 A:ASN31 4.4 14.8 1.0
HB3 A:ASP32 4.4 17.6 1.0
HD21 A:ASN31 4.7 26.0 1.0
HD13 A:ILE130 4.8 24.7 1.0
N A:GLN33 4.8 16.8 1.0
HE2 A:LYS126 4.8 29.8 1.0
HA A:ASP32 4.8 19.0 1.0
O A:HOH661 4.8 24.6 1.0
C A:ASP32 4.9 23.8 1.0
CG A:LYS126 4.9 22.4 1.0
HB2 A:ASP53 5.0 23.9 1.0
HG2 A:LYS126 5.0 26.8 1.0

Chlorine binding site 2 out of 2 in 5bpm

Go back to Chlorine Binding Sites List in 5bpm
Chlorine binding site 2 out of 2 in the Crystal Structure of Unhydrolyzed Atp Bound Human HSP70 Nbd Double Mutant E268Q+R272K.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Unhydrolyzed Atp Bound Human HSP70 Nbd Double Mutant E268Q+R272K. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:39.2
occ:1.00
H A:ILE51 2.6 17.4 1.0
HA A:LEU50 3.2 21.8 1.0
O A:HOH863 3.2 38.0 1.0
HZ1 A:LYS126 3.3 27.4 1.0
HB3 A:ALA54 3.3 19.6 1.0
N A:ILE51 3.4 14.5 1.0
O A:ILE51 3.7 17.2 1.0
O A:HOH725 3.9 16.1 1.0
HB2 A:ALA54 4.0 19.6 1.0
HD12 A:ILE51 4.0 36.4 1.0
HB A:ILE51 4.0 16.4 1.0
CB A:ALA54 4.0 16.3 1.0
CA A:LEU50 4.1 18.1 1.0
NZ A:LYS126 4.1 22.8 1.0
HB3 A:LEU50 4.1 19.3 1.0
HD23 A:LEU50 4.2 25.2 1.0
HE3 A:LYS126 4.2 29.8 1.0
HE2 A:LYS126 4.2 29.8 1.0
C A:LEU50 4.2 17.4 1.0
HD22 A:LEU50 4.3 25.2 1.0
HB1 A:ALA54 4.3 19.6 1.0
CA A:ILE51 4.3 12.8 1.0
CE A:LYS126 4.4 24.8 1.0
C A:ILE51 4.4 17.6 1.0
O A:ARG49 4.6 17.9 1.0
HZ2 A:LYS126 4.6 27.4 1.0
HZ3 A:LYS126 4.6 27.4 1.0
CB A:LEU50 4.6 16.1 1.0
CB A:ILE51 4.6 13.7 1.0
CD2 A:LEU50 4.7 21.0 1.0
O A:HOH632 4.7 30.3 1.0
HD13 A:ILE51 4.7 36.4 1.0
CD1 A:ILE51 4.8 30.3 1.0
O A:HOH731 4.8 42.0 1.0
H A:ALA54 5.0 16.6 1.0

Reference:

D.Narayanan, A.Pflug, T.Christopeit, P.Kyomuhendo, R.A.Engh. Nucleotide Binding to Variants of the HSP70-Nbd. To Be Published.
Page generated: Fri Jul 26 05:37:03 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy