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Chlorine in PDB 5bqe: Crystal Structure of Norrin in Complex with the Cysteine-Rich Domain of Frizzled 4 -Methylated Form

Protein crystallography data

The structure of Crystal Structure of Norrin in Complex with the Cysteine-Rich Domain of Frizzled 4 -Methylated Form, PDB code: 5bqe was solved by T.-H.Chang, F.-L.Hsieh, K.Harlos, E.Y.Jones, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.46 / 2.30
Space group P 43 2 2
Cell size a, b, c (Å), α, β, γ (°) 98.920, 98.920, 120.420, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 22.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Norrin in Complex with the Cysteine-Rich Domain of Frizzled 4 -Methylated Form (pdb code 5bqe). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Norrin in Complex with the Cysteine-Rich Domain of Frizzled 4 -Methylated Form, PDB code: 5bqe:

Chlorine binding site 1 out of 1 in 5bqe

Go back to Chlorine Binding Sites List in 5bqe
Chlorine binding site 1 out of 1 in the Crystal Structure of Norrin in Complex with the Cysteine-Rich Domain of Frizzled 4 -Methylated Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Norrin in Complex with the Cysteine-Rich Domain of Frizzled 4 -Methylated Form within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl202

b:93.7
occ:1.00
N C:SER92 3.3 38.0 1.0
OG C:SER92 3.7 54.0 1.0
CA C:SER91 3.9 39.5 1.0
CB C:SER92 4.0 42.5 1.0
CD C:ARG127 4.0 60.8 1.0
C C:SER91 4.1 39.4 1.0
NE C:ARG127 4.2 79.6 1.0
O C:HOH318 4.3 52.7 1.0
CA C:SER92 4.3 38.3 1.0
NH1 C:ARG127 4.3 73.0 1.0
CZ C:ARG127 4.4 82.2 1.0
OG C:SER91 4.4 37.6 1.0
CB C:SER91 4.6 39.8 1.0
O C:CYS90 4.7 44.3 1.0
N C:SER91 4.9 43.1 1.0

Reference:

T.H.Chang, F.L.Hsieh, M.Zebisch, K.Harlos, J.Elegheert, E.Y.Jones. Structure and Functional Properties of Norrin Mimic Wnt For Signalling with FRIZZLED4, LRP5/6, and Proteoglycan. Elife V. 4 06554 2015.
ISSN: ESSN 2050-084X
PubMed: 26158506
DOI: 10.7554/ELIFE.06554
Page generated: Sat Dec 12 11:32:43 2020

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