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Chlorine in PDB 5bw7: Crystal Structure of Nonfucosylated Fc Y296W Mutant Complexed with Bis-Glycosylated Soluble Form of Fc Gamma Receptor Iiia

Protein crystallography data

The structure of Crystal Structure of Nonfucosylated Fc Y296W Mutant Complexed with Bis-Glycosylated Soluble Form of Fc Gamma Receptor Iiia, PDB code: 5bw7 was solved by Y.Isoda, H.Yagi, T.Satoh, M.Shibata-Koyama, K.Masuda, M.Satoh, K.Kato, S.Iida, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 3.00
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.273, 77.273, 350.983, 90.00, 90.00, 90.00
R / Rfree (%) 20.4 / 25

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Nonfucosylated Fc Y296W Mutant Complexed with Bis-Glycosylated Soluble Form of Fc Gamma Receptor Iiia (pdb code 5bw7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Nonfucosylated Fc Y296W Mutant Complexed with Bis-Glycosylated Soluble Form of Fc Gamma Receptor Iiia, PDB code: 5bw7:

Chlorine binding site 1 out of 1 in 5bw7

Go back to Chlorine Binding Sites List in 5bw7
Chlorine binding site 1 out of 1 in the Crystal Structure of Nonfucosylated Fc Y296W Mutant Complexed with Bis-Glycosylated Soluble Form of Fc Gamma Receptor Iiia


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Nonfucosylated Fc Y296W Mutant Complexed with Bis-Glycosylated Soluble Form of Fc Gamma Receptor Iiia within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1009

b:64.3
occ:1.00
CD1 A:PHE243 3.8 57.7 1.0
C3 A:NAG1007 4.0 72.0 1.0
N2 A:NAG1007 4.1 67.7 1.0
CD A:PRO244 4.4 53.1 1.0
CE1 A:PHE243 4.5 59.2 1.0
C2 A:NAG1007 4.5 68.0 1.0
O3 A:NAG1007 4.7 75.6 1.0
C1 A:NAG1007 4.8 66.9 1.0
CG A:PHE243 4.8 57.2 1.0
O4 A:NAG1007 4.8 83.1 1.0
CB A:PHE243 4.9 52.9 1.0
CG A:PRO244 4.9 52.0 1.0
C4 A:NAG1007 5.0 74.1 1.0

Reference:

Y.Isoda, H.Yagi, T.Satoh, M.Shibata-Koyama, K.Masuda, M.Satoh, K.Kato, S.Iida. Importance of the Side Chain at Position 296 of Antibody Fc in Interactions with Fc Gamma Riiia and Other Fc Gamma Receptors Plos One V. 10 40120 2015.
ISSN: ESSN 1932-6203
PubMed: 26444434
DOI: 10.1371/JOURNAL.PONE.0140120
Page generated: Sat Dec 12 11:33:21 2020

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