Chlorine in PDB 5c0p: The Crystal Structure of Endo-Arabinase From Bacteroides Thetaiotaomicron Vpi-5482

The structure of The Crystal Structure of Endo-Arabinase From Bacteroides Thetaiotaomicron Vpi-5482, PDB code: 5c0p was solved by K.Tan, M.Cuff, G.Joachimiak, M.Endres, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.13 / 1.53
Space group	P 43
Cell size a, b, c (Å), α, β, γ (°)	83.804, 83.804, 43.366, 90.00, 90.00, 90.00
R / Rfree (%)	14.9 / 16.4

The structure of The Crystal Structure of Endo-Arabinase From Bacteroides Thetaiotaomicron Vpi-5482 also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Chlorine atom in the The Crystal Structure of Endo-Arabinase From Bacteroides Thetaiotaomicron Vpi-5482 (pdb code 5c0p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of Endo-Arabinase From Bacteroides Thetaiotaomicron Vpi-5482, PDB code: 5c0p:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the The Crystal Structure of Endo-Arabinase From Bacteroides Thetaiotaomicron Vpi-5482


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Endo-Arabinase From Bacteroides Thetaiotaomicron Vpi-5482 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl403 b:25.6 occ:1.00 O A:HOH769 2.5 31.9 1.0 O A:HOH606 3.1 23.1 1.0 N A:LYS96 3.1 16.6 1.0 O A:HOH518 3.6 30.4 1.0 CE1 A:PHE93 3.7 12.2 1.0 CB A:LYS96 3.7 20.5 1.0 CG A:LYS96 3.8 23.3 1.0 CD A:PRO146 3.8 14.6 1.0 CG A:PRO146 3.8 15.6 1.0 CB A:PHE99 3.8 12.1 1.0 CZ A:PHE93 3.8 11.8 1.0 CA A:ALA95 4.0 16.9 1.0 CA A:LYS96 4.0 16.7 1.0 C A:ALA95 4.0 16.8 1.0 CG A:PHE99 4.2 14.8 1.0 CD1 A:PHE99 4.2 14.7 1.0 CD A:LYS96 4.3 33.8 1.0 O A:ILE94 4.4 19.0 1.0 O A:LYS96 4.5 17.0 1.0 CB A:ALA95 4.7 17.2 1.0 C A:LYS96 4.7 17.2 1.0 CA A:PHE99 4.7 13.3 1.0 OD1 A:ASP98 4.8 25.1 1.0 N A:PHE99 4.9 17.4 1.0 CD1 A:PHE93 4.9 12.4 1.0

Chlorine binding site 2 out of 2 in the The Crystal Structure of Endo-Arabinase From Bacteroides Thetaiotaomicron Vpi-5482


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of Endo-Arabinase From Bacteroides Thetaiotaomicron Vpi-5482 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl404 b:36.5 occ:1.00 O A:HOH703 2.6 14.2 1.0 N A:GLU112 2.9 12.2 1.0 O A:HOH525 3.0 31.4 1.0 O A:HOH759 3.5 25.8 1.0 CA A:TYR111 3.7 9.5 1.0 O A:GLU112 3.7 14.4 1.0 C A:TYR111 3.8 12.1 1.0 CB A:GLU112 3.8 12.4 1.0 CA A:GLU112 3.8 10.9 1.0 CD1 A:LEU57 3.9 12.4 1.0 O A:HOH609 4.1 31.5 1.0 CB A:TYR111 4.2 10.7 1.0 C A:GLU112 4.2 13.6 1.0 O A:HOH793 4.3 24.6 1.0 O A:HOH618 4.3 13.9 1.0 CD1 A:TYR111 4.5 9.6 1.0 O A:VAL110 4.5 12.7 1.0 O A:HOH791 4.7 23.1 1.0 O A:HOH517 4.8 20.6 1.0 CG A:TYR111 4.8 9.2 1.0 N A:TYR111 4.9 10.0 1.0 O A:TYR111 5.0 14.2 1.0

K.Tan, M.Cuff, G.Joachimiak, M.Endres, A.Joachimiak. The Crystal Structure of Endo-Arabinase From Bacteroides Thetaiotaomicron Vpi-5482 To Be Published.