Chlorine in PDB 5c2c: GWS1B Rubisco: Form II Rubisco Derived From Uncultivated Gallionellacea Species (Unliganded Form)

The structure of GWS1B Rubisco: Form II Rubisco Derived From Uncultivated Gallionellacea Species (Unliganded Form), PDB code: 5c2c was solved by M.A.Arbing, V.A.Varaljay, S.Satagopan, F.R.Tabita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.36 / 2.09
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	132.220, 169.310, 76.690, 90.00, 119.20, 90.00
R / Rfree (%)	16.7 / 19.9

The structure of GWS1B Rubisco: Form II Rubisco Derived From Uncultivated Gallionellacea Species (Unliganded Form) also contains other interesting chemical elements:

Magnesium

(Mg)

6 atoms

The binding sites of Chlorine atom in the GWS1B Rubisco: Form II Rubisco Derived From Uncultivated Gallionellacea Species (Unliganded Form) (pdb code 5c2c). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the GWS1B Rubisco: Form II Rubisco Derived From Uncultivated Gallionellacea Species (Unliganded Form), PDB code: 5c2c:

Chlorine binding site 1 out of 1 in the GWS1B Rubisco: Form II Rubisco Derived From Uncultivated Gallionellacea Species (Unliganded Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of GWS1B Rubisco: Form II Rubisco Derived From Uncultivated Gallionellacea Species (Unliganded Form) within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl501 b:59.3 occ:1.00 HE B:ARG288 2.4 47.6 1.0 HH21 B:ARG288 2.9 46.3 1.0 O B:HOH605 3.0 48.9 1.0 HB3 B:HIS321 3.2 38.2 1.0 NE B:ARG288 3.2 39.6 1.0 HG3 B:ARG288 3.6 44.0 1.0 NH2 B:ARG288 3.7 38.6 1.0 HE2 B:HIS291 3.7 41.0 1.0 HG2 B:ARG288 3.7 44.0 1.0 CZ B:ARG288 3.9 39.5 1.0 CB B:HIS321 4.0 31.8 1.0 HG B:SER368 4.0 86.7 1.0 HB2 B:HIS321 4.0 38.2 1.0 CG B:ARG288 4.0 36.7 1.0 OG B:SER368 4.1 72.2 1.0 CD B:ARG288 4.2 37.6 1.0 HA2 B:GLY323 4.3 50.8 1.0 ND1 B:HIS321 4.3 38.6 1.0 NE2 B:HIS291 4.4 34.1 1.0 HH22 B:ARG288 4.4 46.3 1.0 H B:GLY323 4.5 45.8 1.0 CG B:HIS321 4.5 34.5 1.0 HD2 B:HIS291 4.7 39.5 1.0 HD3 B:ARG288 4.8 45.1 1.0 N B:GLY323 4.8 38.1 1.0 HD2 B:ARG288 4.9 45.1 1.0 CD2 B:HIS291 4.9 32.9 1.0 CA B:GLY323 5.0 42.3 1.0 H B:ARG288 5.0 35.2 1.0

V.A.Varaljay, S.Satagopan, J.A.North, B.Witte, M.N.Dourado, K.Anantharaman, M.A.Arbing, S.H.Mccann, R.S.Oremland, J.F.Banfield, K.C.Wrighton, F.R.Tabita. Functional Metagenomic Selection of Ribulose 1, 5-Bisphosphate Carboxylase/Oxygenase From Uncultivated Bacteria. Environ.Microbiol. V. 18 1187 2016.
ISSN: ESSN 1462-2920
PubMed: 26617072
DOI: 10.1111/1462-2920.13138