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Chlorine in PDB 5c33: Crystal Structure of Mouse Ryanodine Receptor 2 SPRY1 Domain

Protein crystallography data

The structure of Crystal Structure of Mouse Ryanodine Receptor 2 SPRY1 Domain, PDB code: 5c33 was solved by Z.Yuchi, F.Van Petegem, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.37 / 1.21
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.246, 64.085, 109.769, 90.00, 90.00, 90.00
R / Rfree (%) 14.3 / 17.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Mouse Ryanodine Receptor 2 SPRY1 Domain (pdb code 5c33). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Mouse Ryanodine Receptor 2 SPRY1 Domain, PDB code: 5c33:

Chlorine binding site 1 out of 1 in 5c33

Go back to Chlorine Binding Sites List in 5c33
Chlorine binding site 1 out of 1 in the Crystal Structure of Mouse Ryanodine Receptor 2 SPRY1 Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Mouse Ryanodine Receptor 2 SPRY1 Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl902

b:51.4
occ:1.00
H13 A:IPA901 2.6 36.8 1.0
HG A:SER653 2.7 24.8 1.0
HE2 A:HIS836 3.2 40.1 1.0
H32 A:IPA901 3.2 39.8 1.0
OG A:SER653 3.6 20.6 1.0
C1 A:IPA901 3.6 30.6 1.0
HE2 A:PHE794 3.7 22.2 1.0
NE2 A:HIS836 3.7 33.4 1.0
HE1 A:HIS836 3.8 36.2 1.0
O A:HOH1091 3.8 26.0 1.0
H12 A:IPA901 4.0 36.8 1.0
H11 A:IPA901 4.1 36.8 1.0
CE1 A:HIS836 4.1 30.2 1.0
O A:HOH1023 4.1 31.9 1.0
C3 A:IPA901 4.2 33.2 1.0
HB2 A:SER653 4.3 19.8 1.0
HB3 A:SER653 4.3 19.8 1.0
CB A:SER653 4.3 16.5 1.0
CE2 A:PHE794 4.5 18.5 1.0
C2 A:IPA901 4.6 47.3 1.0
O A:HOH1216 4.7 46.0 1.0
HA A:ALA796 4.7 30.4 1.0
H33 A:IPA901 4.8 39.8 1.0
H A:GLY797 4.8 34.3 1.0
H31 A:IPA901 4.9 39.8 1.0
CD2 A:HIS836 4.9 29.4 1.0
HZ A:PHE794 5.0 22.9 1.0

Reference:

Z.Yuchi, S.M.Yuen, K.Lau, A.Q.Underhill, R.L.Cornea, J.D.Fessenden, F.Van Petegem. Crystal Structures of Ryanodine Receptor SPRY1 and Tandem-Repeat Domains Reveal A Critical FKBP12 Binding Determinant. Nat Commun V. 6 7947 2015.
ISSN: ESSN 2041-1723
PubMed: 26245150
DOI: 10.1038/NCOMMS8947
Page generated: Sat Jul 12 00:39:53 2025

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