Chlorine »
PDB 5c2b-5cae »
5c80 »
Chlorine in PDB 5c80: X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution
Enzymatic activity of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution
All present enzymatic activity of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution:
2.4.2.3;
2.4.2.3;
Protein crystallography data
The structure of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution, PDB code: 5c80
was solved by
I.I.Prokofev,
A.A.Lashkov,
A.G.Gabdoulkhakov,
C.Betzel,
A.M.Mikhailov,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 45.47 / 2.24 |
| Space group | P 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 61.255, 73.110, 83.137, 71.81, 77.19, 85.69 |
| R / Rfree (%) | 16.8 / 23.7 |
Other elements in 5c80:
The structure of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution also contains other interesting chemical elements:
| Sodium | (Na) | 2 atoms |
Chlorine Binding Sites:
The binding sites of Chlorine atom in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution
(pdb code 5c80). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution, PDB code: 5c80:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Chlorine where determined in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution, PDB code: 5c80:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;
Chlorine binding site 1 out of 6 in 5c80
Go back to
Chlorine Binding Sites List in 5c80
Chlorine binding site 1 out
of 6 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution within 5.0Å range:
|
Chlorine binding site 2 out of 6 in 5c80
Go back to
Chlorine Binding Sites List in 5c80
Chlorine binding site 2 out
of 6 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution within 5.0Å range:
|
Chlorine binding site 3 out of 6 in 5c80
Go back to
Chlorine Binding Sites List in 5c80
Chlorine binding site 3 out
of 6 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution within 5.0Å range:
|
Chlorine binding site 4 out of 6 in 5c80
Go back to
Chlorine Binding Sites List in 5c80
Chlorine binding site 4 out
of 6 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution within 5.0Å range:
|
Chlorine binding site 5 out of 6 in 5c80
Go back to
Chlorine Binding Sites List in 5c80
Chlorine binding site 5 out
of 6 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution within 5.0Å range:
|
Chlorine binding site 6 out of 6 in 5c80
Go back to
Chlorine Binding Sites List in 5c80
Chlorine binding site 6 out
of 6 in the X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with Uridine at 2.24 A Resolution within 5.0Å range:
|
Reference:
I.I.Prokofev,
A.A.Lashkov,
A.G.Gabdoulkhakov,
V.V.Balaev,
T.A.Seregina,
A.S.Mironov,
C.Betzel,
A.M.Mikhailov.
X-Ray Structures of Uridine Phosphorylase From Vibrio Cholerae in Complexes with Uridine, Thymidine, Uracil, Thymine, and Phosphate Anion: Substrate Specificity of Bacterial Uridine Phosphorylases Crystallography Reports V. 61 954 2016.
ISSN: ISSN 1063-7745
DOI: 10.1134/S1063774516060134
Page generated: Sat Dec 12 11:34:34 2020
ISSN: ISSN 1063-7745
DOI: 10.1134/S1063774516060134
Last articles
Zn in 8WB0Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
