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Chlorine in PDB 5d66: Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution

Protein crystallography data

The structure of Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution, PDB code: 5d66 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.23 / 1.00
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 43.268, 43.221, 49.632, 83.85, 89.96, 78.38
R / Rfree (%) 13.9 / 16.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution (pdb code 5d66). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution, PDB code: 5d66:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 5d66

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Chlorine binding site 1 out of 6 in the Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:10.0
occ:1.00
O A:HOH542 3.2 22.8 1.0
O A:HOH639 3.2 16.4 1.0
ND2 A:ASN170 3.4 7.2 1.0
ND2 A:ASN137 3.5 8.0 1.0
CA A:GLY141 3.5 7.8 1.0
CD A:PRO146 3.7 5.7 1.0
CG2 A:ILE145 3.8 5.8 1.0
CB A:TYR139 3.8 10.4 1.0
OD1 A:ASN137 3.8 7.4 1.0
CB A:ILE145 3.9 4.8 1.0
N A:GLY141 4.0 8.0 1.0
CG A:ASN137 4.1 6.7 1.0
CB A:ASN170 4.3 6.3 1.0
CG A:ASN170 4.3 6.3 1.0
N A:PRO146 4.4 4.9 1.0
C A:GLY141 4.4 6.1 1.0
OE2 A:GLU179 4.4 10.3 1.0
CG A:TYR139 4.6 12.8 1.0
CG A:PRO146 4.6 6.9 1.0
O A:THR142 4.6 6.2 1.0
CD2 A:TYR139 4.7 15.9 1.0
CD1 A:ILE145 4.8 5.7 1.0
O A:TYR139 4.8 10.7 1.0
C A:ILE145 4.8 5.1 1.0
CB A:PRO146 4.9 6.1 1.0
C A:TYR139 4.9 9.1 1.0
CA A:ILE145 4.9 4.6 1.0
O A:GLY141 4.9 7.3 1.0
CA A:TYR139 4.9 9.5 1.0
CG1 A:ILE145 4.9 5.3 1.0

Chlorine binding site 2 out of 6 in 5d66

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Chlorine binding site 2 out of 6 in the Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:17.1
occ:1.00
O A:HOH731 3.0 28.3 1.0
O A:HOH707 3.1 29.3 1.0
O A:HOH480 3.1 8.3 1.0
O A:HOH625 3.3 26.1 1.0
N A:LEU120 3.4 6.7 0.6
N A:LEU120 3.4 6.9 0.4
N A:LYS121 3.6 7.3 1.0
C A:TYR119 4.0 6.0 1.0
ND2 A:ASN85 4.0 10.9 1.0
CG A:LYS121 4.0 12.3 1.0
CA A:TYR119 4.1 6.1 1.0
CB A:LYS121 4.2 9.0 1.0
CB A:LEU120 4.2 10.0 0.4
CA A:LEU120 4.2 7.9 0.4
CD A:LYS121 4.3 18.3 1.0
CA A:LEU120 4.3 7.5 0.6
O A:GLY118 4.3 7.4 1.0
C A:LEU120 4.4 6.9 0.4
C A:LEU120 4.4 6.8 0.6
CD1 A:ILE87 4.5 13.3 1.0
CB A:LEU120 4.5 9.5 0.6
CA A:LYS121 4.5 7.2 1.0
OD1 A:ASN85 4.6 8.7 1.0
CG A:ASN85 4.8 7.9 1.0
O A:TYR119 4.9 6.1 1.0
CB A:TYR119 4.9 6.2 1.0

Chlorine binding site 3 out of 6 in 5d66

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Chlorine binding site 3 out of 6 in the Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:16.7
occ:1.00
O A:HOH565 2.6 11.7 1.0
O A:HOH491 2.8 18.9 1.0
OG1 A:THR155 2.9 7.3 1.0
N A:THR155 3.2 5.4 1.0
CB A:HIS152 3.5 6.4 1.0
N A:GLU154 3.6 6.0 0.7
C A:HIS152 3.6 5.3 1.0
N A:GLU154 3.6 5.8 0.3
CB A:THR155 3.7 5.9 1.0
CA A:HIS152 3.7 5.7 1.0
CD1 A:LEU120 3.8 12.5 0.4
O A:HIS152 3.9 5.4 1.0
CB A:GLU154 3.9 7.1 0.7
CB A:GLU154 4.0 6.3 0.3
C A:GLU154 4.0 5.6 0.7
N A:VAL153 4.0 5.5 1.0
C A:GLU154 4.0 5.7 0.3
CA A:THR155 4.0 5.4 1.0
CA A:GLU154 4.0 6.2 0.7
CA A:GLU154 4.1 6.0 0.3
CG A:LEU120 4.1 11.2 0.4
CG A:HIS152 4.3 8.2 1.0
CD2 A:LEU120 4.3 10.5 0.4
O A:HOH761 4.4 22.8 1.0
C A:VAL153 4.5 5.5 1.0
ND1 A:HIS152 4.5 11.4 1.0
O A:HOH595 4.5 10.3 1.0
CA A:GLY118 4.6 6.5 1.0
CD2 A:LEU120 4.7 11.5 0.6
O A:GLY118 4.7 7.4 1.0
CG A:GLU154 4.8 7.8 0.7
CA A:VAL153 4.9 5.7 1.0
CG A:GLU154 4.9 6.8 0.3

Chlorine binding site 4 out of 6 in 5d66

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Chlorine binding site 4 out of 6 in the Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:9.7
occ:1.00
O B:HOH514 3.1 23.6 1.0
O B:HOH628 3.2 17.2 1.0
ND2 B:ASN170 3.3 6.7 1.0
ND2 B:ASN137 3.5 7.7 1.0
CA B:GLY141 3.5 6.8 1.0
CG2 B:ILE145 3.7 5.5 1.0
CB B:TYR139 3.8 9.9 1.0
CD B:PRO146 3.8 5.7 1.0
OD1 B:ASN137 3.8 7.0 1.0
CB B:ILE145 3.9 4.7 1.0
N B:GLY141 4.0 7.6 1.0
CG B:ASN137 4.1 6.7 1.0
CB B:ASN170 4.2 5.7 1.0
CG B:ASN170 4.3 5.7 1.0
N B:PRO146 4.4 4.8 1.0
C B:GLY141 4.5 5.6 1.0
OE2 B:GLU179 4.5 9.9 1.0
CG B:TYR139 4.6 10.6 1.0
CG B:PRO146 4.6 6.4 1.0
O B:THR142 4.6 6.0 1.0
CD1 B:ILE145 4.8 5.9 1.0
C B:ILE145 4.8 4.6 1.0
CD2 B:TYR139 4.8 12.6 1.0
O B:TYR139 4.8 10.1 1.0
C B:TYR139 4.9 7.6 1.0
CB B:PRO146 4.9 5.5 1.0
CA B:ILE145 4.9 4.5 1.0
CA B:TYR139 4.9 8.2 1.0
O B:GLY141 4.9 7.2 1.0
CG1 B:ILE145 5.0 5.3 1.0

Chlorine binding site 5 out of 6 in 5d66

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Chlorine binding site 5 out of 6 in the Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:15.2
occ:1.00
O B:HOH624 2.9 26.9 1.0
OG1 B:THR155 3.0 7.2 1.0
N B:THR155 3.3 5.5 1.0
CB B:HIS152 3.4 6.4 1.0
C B:HIS152 3.5 5.9 1.0
N B:GLU154 3.6 5.6 0.8
N B:GLU154 3.6 5.8 0.2
CA B:HIS152 3.6 6.1 1.0
CD1 B:LEU120 3.7 8.8 0.7
CB B:THR155 3.8 5.8 1.0
N B:VAL153 3.8 5.4 1.0
O B:HIS152 3.9 6.2 1.0
CB B:GLU154 3.9 7.3 0.2
CB B:GLU154 4.0 6.5 0.8
CA B:GLU154 4.0 6.2 0.2
CA B:GLU154 4.0 5.9 0.8
C B:GLU154 4.1 5.6 0.2
C B:GLU154 4.1 5.3 0.8
CA B:THR155 4.1 5.3 1.0
CG B:HIS152 4.3 7.3 1.0
O B:HOH603 4.4 17.7 1.0
C B:VAL153 4.4 5.3 1.0
ND1 B:HIS152 4.5 10.4 1.0
CG B:LEU120 4.6 8.6 0.7
CA B:VAL153 4.7 5.6 1.0
CA B:GLY118 4.8 6.7 1.0
CG B:GLU154 4.9 8.2 0.2
O B:GLY118 4.9 9.6 1.0
CD2 B:LEU120 4.9 10.0 0.3
CG B:GLU154 5.0 8.0 0.8

Chlorine binding site 6 out of 6 in 5d66

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Chlorine binding site 6 out of 6 in the Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of An Ankyrin Repeat Domain (ABAYE2397) From Acinetobacter Baumannii Aye at 1.00 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl303

b:15.7
occ:1.00
O B:HOH611 2.9 38.4 1.0
O B:HOH438 3.0 10.0 1.0
OE1 B:GLN117 3.1 9.3 0.5
O B:HOH466 3.1 10.1 1.0
NE2 B:GLN117 3.2 10.7 0.5
O B:HOH523 3.2 32.9 1.0
NH2 B:ARG150 3.3 18.9 1.0
NE2 B:GLN117 3.6 10.7 0.5
NH1 B:ARG150 3.7 17.5 1.0
CD B:GLN117 3.7 9.5 0.5
CB B:ALA116 3.7 6.7 1.0
CZ B:ARG150 3.9 14.2 1.0
CE1 B:TYR113 4.2 9.3 1.0
CD1 B:TYR113 4.2 8.4 1.0
CD B:GLN117 4.3 9.7 0.5
O B:HOH617 4.3 13.3 1.0
CG B:GLN117 4.6 8.0 0.5
O B:HOH555 4.7 34.0 1.0
OD2 B:ASP108 4.8 7.7 1.0
OD1 B:ASP108 4.8 7.7 1.0
O B:HOH691 4.8 24.6 1.0
NH1 B:ARG138 4.8 13.3 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 26 06:31:47 2024

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