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Chlorine in PDB 5dni: Crystal Structure of Methanocaldococcus Jannaschii Fumarate Hydratase Beta Subunit

Enzymatic activity of Crystal Structure of Methanocaldococcus Jannaschii Fumarate Hydratase Beta Subunit

All present enzymatic activity of Crystal Structure of Methanocaldococcus Jannaschii Fumarate Hydratase Beta Subunit:
4.2.1.32;

Protein crystallography data

The structure of Crystal Structure of Methanocaldococcus Jannaschii Fumarate Hydratase Beta Subunit, PDB code: 5dni was solved by V.Jayaraman, J.Kunala, H.Balaram, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.02 / 2.30
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 85.610, 85.610, 121.830, 90.00, 90.00, 120.00
R / Rfree (%) 18.1 / 23.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Methanocaldococcus Jannaschii Fumarate Hydratase Beta Subunit (pdb code 5dni). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Methanocaldococcus Jannaschii Fumarate Hydratase Beta Subunit, PDB code: 5dni:

Chlorine binding site 1 out of 1 in 5dni

Go back to Chlorine Binding Sites List in 5dni
Chlorine binding site 1 out of 1 in the Crystal Structure of Methanocaldococcus Jannaschii Fumarate Hydratase Beta Subunit


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Methanocaldococcus Jannaschii Fumarate Hydratase Beta Subunit within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:40.2
occ:1.00
N A:ASP33 3.2 35.7 1.0
O A:HOH329 3.3 33.6 1.0
NH1 B:ARG84 3.3 39.6 1.0
O A:HOH343 3.3 44.3 1.0
CB A:ASP33 3.4 41.1 1.0
NH2 B:ARG84 3.4 37.2 1.0
CB A:ARG32 3.5 35.5 1.0
CZ A:ARG32 3.7 40.0 1.0
CB A:ARG84 3.7 41.7 1.0
SD A:MET85 3.8 41.4 1.0
NH2 A:ARG32 3.8 36.1 1.0
CZ B:ARG84 3.9 39.5 1.0
CA A:ASP33 3.9 38.3 1.0
NE A:ARG32 3.9 35.7 1.0
CG A:ARG32 3.9 34.7 1.0
NH1 A:ARG32 3.9 43.0 1.0
CE A:MET85 4.1 35.5 1.0
C A:ARG32 4.1 36.3 1.0
CA A:ARG32 4.1 36.4 1.0
CG A:ARG84 4.2 42.0 1.0
CD A:ARG32 4.5 32.6 1.0
CG A:ASP33 4.8 43.7 1.0
OE1 A:GLU153 5.0 34.7 1.0

Reference:

V.Jayaraman, J.Kunala, K.S.Bhagyashree, S.Manu, S.V.Bhat. Biochemical Investigation of Fumarate Hydratase From Methanocaldococcus Jannaschii To Be Published.
Page generated: Sat Dec 12 11:39:13 2020

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