Atomistry » Chlorine » PDB 5e20-5eae » 5e26
Atomistry »
  Chlorine »
    PDB 5e20-5eae »
      5e26 »

Chlorine in PDB 5e26: Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate

Enzymatic activity of Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate

All present enzymatic activity of Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate:
2.7.1.33;

Protein crystallography data

The structure of Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate, PDB code: 5e26 was solved by A.Dong, P.Loppnau, M.Ravichandran, C.Cheng, W.Tempel, A.Seitova, A.Hutchinson, B.S.Hong, C.Bountra, C.H.Arrowsmith, A.M.Edwards, P.J.Brown, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.01 / 2.14
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 108.874, 109.717, 142.571, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 25.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate (pdb code 5e26). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate, PDB code: 5e26:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5e26

Go back to Chlorine Binding Sites List in 5e26
Chlorine binding site 1 out of 2 in the Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl603

b:30.9
occ:1.00
OH B:TYR227 2.9 30.1 1.0
NH2 B:ARG249 3.1 46.6 1.0
NE B:ARG249 3.2 45.4 1.0
O B:HOH706 3.2 23.2 1.0
CD B:PRO230 3.6 29.5 1.0
CZ B:ARG249 3.6 45.4 1.0
CB B:PRO212 3.8 34.0 1.0
CE1 B:TYR227 3.8 29.2 1.0
CB B:PHE211 3.8 36.0 1.0
CA B:PRO212 3.8 34.0 1.0
CZ B:TYR227 3.8 29.6 1.0
CD1 B:LEU245 3.9 38.1 1.0
CG B:PRO230 3.9 29.8 1.0
CD B:ARG249 4.3 44.5 1.0
CG B:PHE211 4.4 36.5 1.0
CG B:ARG249 4.4 44.2 1.0
O B:PHE228 4.4 29.0 1.0
N B:PRO212 4.6 33.4 1.0
CB B:ARG249 4.6 42.6 1.0
CD1 B:PHE211 4.7 36.7 1.0
CA B:PHE211 4.8 37.1 1.0
CG B:LEU245 4.9 38.9 1.0
NH1 B:ARG249 4.9 47.2 1.0
N B:TRP213 4.9 30.2 1.0
C B:PHE211 4.9 34.9 1.0
C B:PRO212 5.0 32.2 1.0
CG B:PRO212 5.0 34.0 1.0

Chlorine binding site 2 out of 2 in 5e26

Go back to Chlorine Binding Sites List in 5e26
Chlorine binding site 2 out of 2 in the Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl604

b:31.8
occ:1.00
OH D:TYR227 2.9 29.6 1.0
O D:HOH734 3.0 25.6 1.0
NH2 D:ARG249 3.2 29.9 1.0
NE D:ARG249 3.2 32.2 1.0
CZ D:ARG249 3.6 31.4 1.0
CD D:PRO230 3.7 32.2 1.0
CE1 D:TYR227 3.8 28.9 1.0
CB D:PRO212 3.8 35.0 1.0
CZ D:TYR227 3.8 28.4 1.0
CD1 D:LEU245 3.8 34.6 1.0
CA D:PRO212 3.9 34.8 1.0
CB D:PHE211 3.9 34.3 1.0
CG D:PRO230 4.1 33.5 1.0
CG D:PHE211 4.1 33.8 1.0
CB D:ARG249 4.3 33.8 1.0
CD D:ARG249 4.4 33.3 1.0
CG D:ARG249 4.4 33.6 1.0
CD1 D:PHE211 4.5 33.8 1.0
CD2 D:PHE211 4.6 33.1 1.0
O D:PHE228 4.6 29.2 1.0
N D:PRO212 4.6 35.0 1.0
CG D:LEU245 4.8 33.4 1.0
CA D:PHE211 4.9 35.0 1.0
NH1 D:ARG249 5.0 32.4 1.0
O D:LEU245 5.0 35.0 1.0

Reference:

P.Loppnau, A.Dong, M.Ravichandran, C.Cheng, W.Tempel, A.Seitova, A.Hutchinson, B.S.Hong, C.Bountra, C.H.Arrowsmith, A.M.Edwards, P.J.Brown, Structural Genomics Consortium (Sgc). Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate To Be Published.
Page generated: Sat Jul 12 01:30:22 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy