Atomistry » Chlorine » PDB 5e1x-5eac » 5e26
Atomistry »
  Chlorine »
    PDB 5e1x-5eac »
      5e26 »

Chlorine in PDB 5e26: Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate

Enzymatic activity of Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate

All present enzymatic activity of Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate:
2.7.1.33;

Protein crystallography data

The structure of Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate, PDB code: 5e26 was solved by A.Dong, P.Loppnau, M.Ravichandran, C.Cheng, W.Tempel, A.Seitova, A.Hutchinson, B.S.Hong, C.Bountra, C.H.Arrowsmith, A.M.Edwards, P.J.Brown, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.01 / 2.14
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 108.874, 109.717, 142.571, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 25.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate (pdb code 5e26). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate, PDB code: 5e26:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5e26

Go back to Chlorine Binding Sites List in 5e26
Chlorine binding site 1 out of 2 in the Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl603

b:30.9
occ:1.00
OH B:TYR227 2.9 30.1 1.0
NH2 B:ARG249 3.1 46.6 1.0
NE B:ARG249 3.2 45.4 1.0
O B:HOH706 3.2 23.2 1.0
CD B:PRO230 3.6 29.5 1.0
CZ B:ARG249 3.6 45.4 1.0
CB B:PRO212 3.8 34.0 1.0
CE1 B:TYR227 3.8 29.2 1.0
CB B:PHE211 3.8 36.0 1.0
CA B:PRO212 3.8 34.0 1.0
CZ B:TYR227 3.8 29.6 1.0
CD1 B:LEU245 3.9 38.1 1.0
CG B:PRO230 3.9 29.8 1.0
CD B:ARG249 4.3 44.5 1.0
CG B:PHE211 4.4 36.5 1.0
CG B:ARG249 4.4 44.2 1.0
O B:PHE228 4.4 29.0 1.0
N B:PRO212 4.6 33.4 1.0
CB B:ARG249 4.6 42.6 1.0
CD1 B:PHE211 4.7 36.7 1.0
CA B:PHE211 4.8 37.1 1.0
CG B:LEU245 4.9 38.9 1.0
NH1 B:ARG249 4.9 47.2 1.0
N B:TRP213 4.9 30.2 1.0
C B:PHE211 4.9 34.9 1.0
C B:PRO212 5.0 32.2 1.0
CG B:PRO212 5.0 34.0 1.0

Chlorine binding site 2 out of 2 in 5e26

Go back to Chlorine Binding Sites List in 5e26
Chlorine binding site 2 out of 2 in the Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl604

b:31.8
occ:1.00
OH D:TYR227 2.9 29.6 1.0
O D:HOH734 3.0 25.6 1.0
NH2 D:ARG249 3.2 29.9 1.0
NE D:ARG249 3.2 32.2 1.0
CZ D:ARG249 3.6 31.4 1.0
CD D:PRO230 3.7 32.2 1.0
CE1 D:TYR227 3.8 28.9 1.0
CB D:PRO212 3.8 35.0 1.0
CZ D:TYR227 3.8 28.4 1.0
CD1 D:LEU245 3.8 34.6 1.0
CA D:PRO212 3.9 34.8 1.0
CB D:PHE211 3.9 34.3 1.0
CG D:PRO230 4.1 33.5 1.0
CG D:PHE211 4.1 33.8 1.0
CB D:ARG249 4.3 33.8 1.0
CD D:ARG249 4.4 33.3 1.0
CG D:ARG249 4.4 33.6 1.0
CD1 D:PHE211 4.5 33.8 1.0
CD2 D:PHE211 4.6 33.1 1.0
O D:PHE228 4.6 29.2 1.0
N D:PRO212 4.6 35.0 1.0
CG D:LEU245 4.8 33.4 1.0
CA D:PHE211 4.9 35.0 1.0
NH1 D:ARG249 5.0 32.4 1.0
O D:LEU245 5.0 35.0 1.0

Reference:

P.Loppnau, A.Dong, M.Ravichandran, C.Cheng, W.Tempel, A.Seitova, A.Hutchinson, B.S.Hong, C.Bountra, C.H.Arrowsmith, A.M.Edwards, P.J.Brown, Structural Genomics Consortium (Sgc). Crystal Structure of Human PANK2: the Catalytic Core Domain in Complex with Pantothenate and Adenosine Diphosphate To Be Published.
Page generated: Sat Dec 12 11:40:16 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy