Chlorine in PDB 5e6u: Structures of Leukocyte Integrin ALB2: the Ai Domain, the Headpiece, and the Pocket For the Internal Ligand

The structure of Structures of Leukocyte Integrin ALB2: the Ai Domain, the Headpiece, and the Pocket For the Internal Ligand, PDB code: 5e6u was solved by M.Sen, T.A.Springer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.44 / 2.50
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	154.980, 154.980, 115.450, 90.00, 90.00, 120.00
R / Rfree (%)	17.9 / 22.6

The structure of Structures of Leukocyte Integrin ALB2: the Ai Domain, the Headpiece, and the Pocket For the Internal Ligand also contains other interesting chemical elements:

Magnesium	(Mg)	2 atoms
Calcium	(Ca)	4 atoms

The binding sites of Chlorine atom in the Structures of Leukocyte Integrin ALB2: the Ai Domain, the Headpiece, and the Pocket For the Internal Ligand (pdb code 5e6u). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structures of Leukocyte Integrin ALB2: the Ai Domain, the Headpiece, and the Pocket For the Internal Ligand, PDB code: 5e6u:

Chlorine binding site 1 out of 1 in the Structures of Leukocyte Integrin ALB2: the Ai Domain, the Headpiece, and the Pocket For the Internal Ligand


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structures of Leukocyte Integrin ALB2: the Ai Domain, the Headpiece, and the Pocket For the Internal Ligand within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl2004 b:61.1 occ:1.00 MG A:MG2001 2.2 25.6 0.8 O A:HOH4027 2.7 47.5 1.0 OG A:SER141 2.9 31.7 1.0 OG A:SER139 3.0 39.6 1.0 CB A:SER139 3.2 39.8 1.0 O A:HOH4091 3.2 35.1 1.0 CB A:SER141 3.3 33.2 1.0 O A:HOH4066 3.3 32.7 1.0 O A:HOH4357 3.5 39.4 1.0 N A:SER141 3.7 42.4 1.0 OG1 A:THR206 3.7 41.6 1.0 O A:HOH4245 4.1 31.2 1.0 CA A:SER141 4.1 35.8 1.0 N A:MET140 4.2 39.3 1.0 OD1 A:ASP239 4.3 41.8 1.0 CG A:MET140 4.3 47.3 1.0 CA A:SER139 4.4 39.7 1.0 C A:SER139 4.5 35.2 1.0 C A:MET140 4.6 41.2 1.0 O A:LEU204 4.7 40.3 1.0 CA A:MET140 4.9 43.6 1.0 OD2 A:ASP239 5.0 41.9 1.0

M.Sen, T.A.Springer. Leukocyte Integrin Alpha L Beta 2 Headpiece Structures: the Alpha I Domain, the Pocket For the Internal Ligand, and Concerted Movements of Its Loops. Proc.Natl.Acad.Sci.Usa V. 113 2940 2016.
ISSN: ESSN 1091-6490
PubMed: 26936951
DOI: 10.1073/PNAS.1601379113