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Chlorine in PDB 5efd: Crystal Structure of A Surface Pocket Creating Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27

Enzymatic activity of Crystal Structure of A Surface Pocket Creating Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27

All present enzymatic activity of Crystal Structure of A Surface Pocket Creating Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27:
3.2.1.8;

Protein crystallography data

The structure of Crystal Structure of A Surface Pocket Creating Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27, PDB code: 5efd was solved by P.Mahanta, A.Bhardwaj, V.S.Reddy, S.Ramakumar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 88.25 / 1.67
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.990, 76.600, 176.490, 90.00, 90.00, 90.00
R / Rfree (%) 15.8 / 18.7

Other elements in 5efd:

The structure of Crystal Structure of A Surface Pocket Creating Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Surface Pocket Creating Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 (pdb code 5efd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Surface Pocket Creating Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27, PDB code: 5efd:

Chlorine binding site 1 out of 1 in 5efd

Go back to Chlorine Binding Sites List in 5efd
Chlorine binding site 1 out of 1 in the Crystal Structure of A Surface Pocket Creating Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Surface Pocket Creating Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl406

b:39.5
occ:1.00
 NH1 A:ARG162 3.3 13.6 1.0
CG A:ARG162 3.6 12.2 1.0
CD A:ARG162 3.6 12.2 1.0
CD2 A:HIS90 4.0 13.2 1.0
CZ A:ARG162 4.2 13.5 1.0
NE2 A:HIS90 4.3 13.7 1.0
CA A:SER164 4.3 13.3 1.0
NE A:ARG162 4.4 12.3 1.0
N A:SER164 4.4 12.9 1.0
CB A:SER164 4.4 12.9 1.0
C A:GLU163 4.7 13.6 1.0
O A:HOH694 4.7 9.9 1.0
O A:GLU163 4.7 14.1 1.0
CG A:HIS90 4.7 12.5 1.0
O A:HOH529 4.9 15.9 1.0
CE1 A:HIS90 5.0 12.8 1.0

Reference:

P.Mahanta, A.Bhardwaj, V.S.Reddy, S.Ramakumar. Crystal Structure of A Surface Pocket Creating Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 To Be Published.
Page generated: Fri Jul 26 07:18:41 2024

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