Chlorine in PDB 5eiv: Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide

The structure of Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide, PDB code: 5eiv was solved by L.Zhou, M.Blaszczyk, D.Chirgadze, D.Bihan, R.W.Farndale, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	70.58 / 2.41
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	38.707, 136.585, 70.584, 90.00, 90.05, 90.00
R / Rfree (%)	17.4 / 22

The structure of Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide also contains other interesting chemical elements:

Sodium

(Na)

2 atoms

The binding sites of Chlorine atom in the Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide (pdb code 5eiv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide, PDB code: 5eiv:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl203 b:57.0 occ:1.00 O A:GLY161 3.8 47.7 1.0 C A:GLY161 3.9 45.4 1.0 CA A:GLY161 3.9 43.5 1.0 O A:ALA119 4.2 49.8 1.0 CB A:ALA119 4.3 49.0 1.0 N A:ALA162 4.6 43.3 1.0 N A:ALA119 4.7 49.9 1.0 O A:HOH304 4.9 46.1 1.0 CA A:ALA119 4.9 50.4 1.0 C A:ALA119 5.0 47.3 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl204 b:47.1 occ:1.00 OD1 F:HYP9 3.1 30.4 1.0 O A:HOH303 3.4 36.0 1.0 NH2 A:ARG184 3.4 33.3 1.0 N A:VAL187 3.7 33.3 1.0 CA A:GLU186 4.0 33.7 1.0 CG F:HYP9 4.2 30.6 1.0 CG2 A:VAL187 4.2 33.9 1.0 CB A:VAL187 4.2 36.1 1.0 C A:GLU186 4.4 32.3 1.0 CG A:GLU186 4.4 40.1 1.0 CB A:GLU186 4.5 33.4 1.0 CZ A:ARG184 4.5 30.0 1.0 CA A:VAL187 4.6 34.4 1.0 NH1 A:ARG184 4.7 28.2 1.0 NH2 A:ARG104 4.8 34.8 1.0 O A:SER185 4.9 30.4 1.0 CD F:HYP9 4.9 30.1 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Complex of Osteoclast-Associated Immunoglobulin- Like Receptor (Oscar) and A Synthetic Collagen Consensus Peptide within 5.0Å range:

L.Zhou, J.M.Hinerman, M.Blaszczyk, J.L.Miller, D.G.Conrady, A.D.Barrow, D.Y.Chirgadze, D.Bihan, R.W.Farndale, A.B.Herr. Structural Basis For Collagen Recognition By the Immune Receptor Oscar. Blood V. 127 529 2016.
ISSN: ESSN 1528-0020
PubMed: 26552697
DOI: 10.1182/BLOOD-2015-08-667055