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Chlorine in PDB 5ejy: Structure of Dictyostelium Discoideum Myosin VII MYTH4-Ferm MF1 Domain

Protein crystallography data

The structure of Structure of Dictyostelium Discoideum Myosin VII MYTH4-Ferm MF1 Domain, PDB code: 5ejy was solved by S.Sirigu, M.A.Titus, A.Houdusse, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.31 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 60.210, 90.540, 148.720, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 23

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Dictyostelium Discoideum Myosin VII MYTH4-Ferm MF1 Domain (pdb code 5ejy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Dictyostelium Discoideum Myosin VII MYTH4-Ferm MF1 Domain, PDB code: 5ejy:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5ejy

Go back to Chlorine Binding Sites List in 5ejy
Chlorine binding site 1 out of 2 in the Structure of Dictyostelium Discoideum Myosin VII MYTH4-Ferm MF1 Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Dictyostelium Discoideum Myosin VII MYTH4-Ferm MF1 Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:49.6
occ:1.00
O A:HOH1001 2.4 49.2 1.0
O A:HOH1116 2.5 51.2 1.0
O A:HOH1006 3.6 49.0 1.0
N A:SER87 3.6 34.8 1.0
CB A:HIS86 3.7 28.5 1.0
CA A:HIS86 3.7 32.2 1.0
OE1 A:GLN91 3.8 38.3 1.0
ND1 A:HIS86 3.8 29.2 1.0
N A:ASP88 4.0 38.7 1.0
C A:HIS86 4.1 34.4 1.0
OG A:SER87 4.1 44.4 1.0
CD A:GLN91 4.1 35.4 1.0
NE2 A:GLN91 4.2 42.0 1.0
CG A:HIS86 4.2 32.7 1.0
CB A:ASP88 4.2 39.0 1.0
OG A:SER136 4.4 29.6 1.0
CB A:SER136 4.4 29.6 1.0
CA A:SER87 4.6 41.6 1.0
CA A:ASP88 4.8 36.6 1.0
O A:HOH1149 4.8 51.2 1.0
C A:SER87 4.8 44.6 1.0
O A:VAL85 4.9 32.9 1.0
CB A:SER87 4.9 42.1 1.0
CB A:GLN91 4.9 32.5 1.0
N A:HIS86 5.0 33.2 1.0

Chlorine binding site 2 out of 2 in 5ejy

Go back to Chlorine Binding Sites List in 5ejy
Chlorine binding site 2 out of 2 in the Structure of Dictyostelium Discoideum Myosin VII MYTH4-Ferm MF1 Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Dictyostelium Discoideum Myosin VII MYTH4-Ferm MF1 Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl603

b:67.1
occ:1.00
O A:HOH1101 2.7 54.0 1.0
O A:HOH1203 3.2 52.2 1.0
CG2 A:VAL85 3.9 33.8 1.0
O A:HOH834 3.9 42.2 1.0
O A:LYS58 4.1 37.3 1.0
O A:PHE60 4.2 36.3 1.0
O A:HOH1169 4.4 55.2 1.0
O A:ASN59 4.5 31.5 1.0
C A:ASN59 4.8 33.3 1.0
O A:HOH752 4.9 30.0 1.0
O A:HOH1201 4.9 58.2 1.0
CB A:VAL85 4.9 32.5 1.0
CA A:ASN59 5.0 33.8 1.0

Reference:

V.J.Planelles-Herrero, F.Blanc, S.Sirigu, H.Sirkia, J.Clause, Y.Sourigues, D.O.Johnsrud, B.Amigues, M.Cecchini, S.P.Gilbert, A.Houdusse, M.A.Titus. Myosin MYTH4-Ferm Structures Highlight Important Principles of Convergent Evolution. Proc.Natl.Acad.Sci.Usa V. 113 E2906 2016.
ISSN: ESSN 1091-6490
PubMed: 27166421
DOI: 10.1073/PNAS.1600736113
Page generated: Fri Jul 26 07:23:19 2024

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