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Chlorine in PDB 5eyi: Structure of Prrsv Apo-NSP11 at 2.16A

Protein crystallography data

The structure of Structure of Prrsv Apo-NSP11 at 2.16A, PDB code: 5eyi was solved by M.F.Zhang, Z.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.16
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 75.299, 75.299, 199.489, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 21

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Prrsv Apo-NSP11 at 2.16A (pdb code 5eyi). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Prrsv Apo-NSP11 at 2.16A, PDB code: 5eyi:

Chlorine binding site 1 out of 1 in 5eyi

Go back to Chlorine Binding Sites List in 5eyi
Chlorine binding site 1 out of 1 in the Structure of Prrsv Apo-NSP11 at 2.16A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Prrsv Apo-NSP11 at 2.16A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:49.5
occ:1.00
O B:HOH328 2.8 44.2 1.0
CE1 A:HIS129 3.5 39.7 1.0
OG1 A:THR217 3.5 29.6 1.0
CE1 A:HIS144 3.6 20.5 1.0
N A:GLY142 3.9 26.3 1.0
ND1 A:HIS129 4.0 41.4 1.0
CG2 A:THR217 4.0 30.7 1.0
CB A:THR217 4.2 30.1 1.0
CA A:GLY142 4.2 28.0 1.0
NE2 A:HIS144 4.4 20.6 1.0
ND1 A:HIS144 4.6 20.7 1.0
CD1 A:TYR219 4.6 21.9 1.0
NE2 A:HIS129 4.7 39.9 1.0
CE1 A:TYR219 4.8 22.6 1.0
C A:GLY141 4.8 26.4 1.0
CA A:GLY141 4.8 27.5 1.0

Reference:

M.Zhang, X.Li, Z.Deng, Z.Chen, Y.Liu, Y.Gao, W.Wu, Z.Chen. Structural Biology of the Arterivirus NSP11 Endoribonucleases. J. Virol. V. 91 2017.
ISSN: ESSN 1098-5514
PubMed: 27795409
DOI: 10.1128/JVI.01309-16
Page generated: Fri Jul 26 07:34:10 2024

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