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Chlorine in PDB 5ezi: Crystal Structure of Fab of Parasite Invasion Inhibitory Antibody C1 - Hexagonal Form

Protein crystallography data

The structure of Crystal Structure of Fab of Parasite Invasion Inhibitory Antibody C1 - Hexagonal Form, PDB code: 5ezi was solved by P.Favuzza, G.Pluschke, M.G.Rudolph, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.15 / 1.61
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 82.700, 82.700, 361.880, 90.00, 90.00, 120.00
R / Rfree (%) 19.5 / 22.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Fab of Parasite Invasion Inhibitory Antibody C1 - Hexagonal Form (pdb code 5ezi). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Fab of Parasite Invasion Inhibitory Antibody C1 - Hexagonal Form, PDB code: 5ezi:

Chlorine binding site 1 out of 1 in 5ezi

Go back to Chlorine Binding Sites List in 5ezi
Chlorine binding site 1 out of 1 in the Crystal Structure of Fab of Parasite Invasion Inhibitory Antibody C1 - Hexagonal Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Fab of Parasite Invasion Inhibitory Antibody C1 - Hexagonal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl510

b:39.4
occ:1.00
O H:HOH620 2.9 41.8 1.0
N H:TRP61 3.2 28.6 1.0
N L:PHE122 3.3 29.0 1.0
O H:HOH721 3.4 54.2 1.0
CA L:THR121 3.6 33.0 1.0
CA H:GLU60 3.8 33.5 1.0
CD2 L:PHE122 3.8 27.1 1.0
CB H:TRP61 3.9 26.2 1.0
C L:THR121 4.0 34.3 1.0
C H:GLU60 4.0 32.6 1.0
CB L:THR121 4.1 36.3 1.0
CG2 L:THR121 4.1 37.6 1.0
CA H:TRP61 4.2 26.4 1.0
CG H:GLU60 4.2 42.7 1.0
CB L:PHE122 4.2 29.7 1.0
O H:GLN59 4.3 33.1 1.0
CA L:PHE122 4.3 29.8 1.0
CG L:PHE122 4.4 29.0 1.0
CB H:GLU60 4.5 33.0 1.0
O H:TRP61 4.5 34.9 1.0
O L:ARG120 4.6 35.0 1.0
CE2 L:PHE122 4.7 29.4 1.0
O L:PHE122 4.7 31.8 1.0
N L:THR121 4.7 32.8 1.0
N H:GLU60 4.8 32.3 1.0
O L:HOH395 4.8 59.5 1.0
C H:TRP61 4.9 28.1 1.0
C H:GLN59 4.9 34.8 1.0

Reference:

P.Favuzza, E.Guffart, M.Tamborrini, B.Scherer, A.M.Dreyer, A.C.Rufer, J.Erny, J.Hoernschemeyer, R.Thoma, G.Schmid, B.Gsell, A.Lamelas, J.Benz, C.Joseph, H.Matile, G.Pluschke, M.G.Rudolph. Structure of the Malaria Vaccine Candidate Antigen Cyrpa and Its Complex with A Parasite Invasion Inhibitory Antibody. Elife V. 6 2017.
ISSN: ESSN 2050-084X
PubMed: 28195038
DOI: 10.7554/ELIFE.20383
Page generated: Sat Dec 12 11:42:22 2020

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