Atomistry » Chlorine » PDB 5f02-5f63 » 5f46
Atomistry »
  Chlorine »
    PDB 5f02-5f63 »
      5f46 »

Chlorine in PDB 5f46: Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form

Protein crystallography data

The structure of Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form, PDB code: 5f46 was solved by Z.Xu, T.Skarina, P.J.Stogios, V.Yim, A.Savchenko, W.F.Anderson, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.84 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.850, 61.807, 114.830, 90.00, 90.00, 90.00
R / Rfree (%) 20.9 / 25.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form (pdb code 5f46). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form, PDB code: 5f46:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5f46

Go back to Chlorine Binding Sites List in 5f46
Chlorine binding site 1 out of 2 in the Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:70.9
occ:1.00
N A:ILE42 3.3 46.7 1.0
NH2 A:ARG29 3.4 48.9 1.0
O A:PHE40 3.5 47.2 1.0
CA A:SER41 3.6 50.9 1.0
O A:HOH338 3.6 60.8 1.0
NH1 A:ARG29 3.8 48.3 1.0
CG2 A:ILE42 3.9 45.7 1.0
C A:SER41 3.9 48.1 1.0
CZ A:ARG29 4.1 47.7 1.0
CB A:ILE42 4.2 43.9 1.0
C A:PHE40 4.3 49.4 1.0
CA A:ILE42 4.3 43.0 1.0
N A:SER41 4.4 50.0 1.0
CB A:SER41 4.5 53.6 1.0
OG A:SER41 4.8 58.1 1.0
O A:HOH381 4.9 55.1 1.0

Chlorine binding site 2 out of 2 in 5f46

Go back to Chlorine Binding Sites List in 5f46
Chlorine binding site 2 out of 2 in the Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:64.0
occ:1.00
NZ A:LYS118 3.0 32.2 1.0
CE1 A:PHE114 3.5 31.3 1.0
CZ A:PHE114 3.7 32.1 1.0
CD A:LYS118 3.8 34.5 1.0
CE A:LYS118 3.9 31.9 1.0
CG A:LYS118 4.2 32.6 1.0
NH2 A:ARG15 4.3 47.1 1.0
O A:HOH438 4.3 75.0 1.0
NH1 A:ARG15 4.4 45.5 1.0
O A:HOH346 4.5 41.9 1.0
CZ A:ARG15 4.5 50.9 1.0
OH A:TYR58 4.5 36.5 1.0
CD1 A:PHE114 4.6 34.5 1.0
O A:HOH356 4.6 41.0 1.0
CE2 A:PHE114 4.9 35.7 1.0
CZ A:TYR58 4.9 33.7 1.0
CE1 A:TYR58 5.0 33.8 1.0

Reference:

Z.Xu, P.J.Stogios, A.T.Quaile, K.J.Forsberg, S.Patel, T.Skarina, S.Houliston, C.Arrowsmith, G.Dantas, A.Savchenko. Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes. Acs Infect Dis V. 3 653 2017.
ISSN: ESSN 2373-8227
PubMed: 28756664
DOI: 10.1021/ACSINFECDIS.7B00068
Page generated: Fri Jul 26 07:37:59 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy