Atomistry » Chlorine » PDB 5f01-5f62 » 5f46
Atomistry »
  Chlorine »
    PDB 5f01-5f62 »
      5f46 »

Chlorine in PDB 5f46: Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form

Protein crystallography data

The structure of Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form, PDB code: 5f46 was solved by Z.Xu, T.Skarina, P.J.Stogios, V.Yim, A.Savchenko, W.F.Anderson, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.84 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.850, 61.807, 114.830, 90.00, 90.00, 90.00
R / Rfree (%) 20.9 / 25.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form (pdb code 5f46). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form, PDB code: 5f46:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5f46

Go back to Chlorine Binding Sites List in 5f46
Chlorine binding site 1 out of 2 in the Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:70.9
occ:1.00
N A:ILE42 3.3 46.7 1.0
NH2 A:ARG29 3.4 48.9 1.0
O A:PHE40 3.5 47.2 1.0
CA A:SER41 3.6 50.9 1.0
O A:HOH338 3.6 60.8 1.0
NH1 A:ARG29 3.8 48.3 1.0
CG2 A:ILE42 3.9 45.7 1.0
C A:SER41 3.9 48.1 1.0
CZ A:ARG29 4.1 47.7 1.0
CB A:ILE42 4.2 43.9 1.0
C A:PHE40 4.3 49.4 1.0
CA A:ILE42 4.3 43.0 1.0
N A:SER41 4.4 50.0 1.0
CB A:SER41 4.5 53.6 1.0
OG A:SER41 4.8 58.1 1.0
O A:HOH381 4.9 55.1 1.0

Chlorine binding site 2 out of 2 in 5f46

Go back to Chlorine Binding Sites List in 5f46
Chlorine binding site 2 out of 2 in the Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An Aminoglycoside Acetyltransferase Meta-AAC0020 From An Uncultured Soil Metagenomic Sample, Apoenzyme Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:64.0
occ:1.00
NZ A:LYS118 3.0 32.2 1.0
CE1 A:PHE114 3.5 31.3 1.0
CZ A:PHE114 3.7 32.1 1.0
CD A:LYS118 3.8 34.5 1.0
CE A:LYS118 3.9 31.9 1.0
CG A:LYS118 4.2 32.6 1.0
NH2 A:ARG15 4.3 47.1 1.0
O A:HOH438 4.3 75.0 1.0
NH1 A:ARG15 4.4 45.5 1.0
O A:HOH346 4.5 41.9 1.0
CZ A:ARG15 4.5 50.9 1.0
OH A:TYR58 4.5 36.5 1.0
CD1 A:PHE114 4.6 34.5 1.0
O A:HOH356 4.6 41.0 1.0
CE2 A:PHE114 4.9 35.7 1.0
CZ A:TYR58 4.9 33.7 1.0
CE1 A:TYR58 5.0 33.8 1.0

Reference:

Z.Xu, P.J.Stogios, A.T.Quaile, K.J.Forsberg, S.Patel, T.Skarina, S.Houliston, C.Arrowsmith, G.Dantas, A.Savchenko. Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes. Acs Infect Dis V. 3 653 2017.
ISSN: ESSN 2373-8227
PubMed: 28756664
DOI: 10.1021/ACSINFECDIS.7B00068
Page generated: Sat Dec 12 11:42:50 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy