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Chlorine in PDB 5f8p: A Novel Inhibitor of the Obesity-Related Protein Fto

Protein crystallography data

The structure of A Novel Inhibitor of the Obesity-Related Protein Fto, PDB code: 5f8p was solved by J.Chai, B.Zhou, W.Liu, Z.Han, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.87 / 2.20
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 142.218, 142.218, 83.028, 90.00, 90.00, 120.00
R / Rfree (%) 18.8 / 23.4

Other elements in 5f8p:

The structure of A Novel Inhibitor of the Obesity-Related Protein Fto also contains other interesting chemical elements:

Iron (Fe) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the A Novel Inhibitor of the Obesity-Related Protein Fto (pdb code 5f8p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the A Novel Inhibitor of the Obesity-Related Protein Fto, PDB code: 5f8p:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5f8p

Go back to Chlorine Binding Sites List in 5f8p
Chlorine binding site 1 out of 2 in the A Novel Inhibitor of the Obesity-Related Protein Fto


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of A Novel Inhibitor of the Obesity-Related Protein Fto within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl602

b:70.7
occ:1.00
CL1 A:FIJ602 0.0 70.7 1.0
C05 A:FIJ602 1.7 65.4 1.0
C06 A:FIJ602 2.7 60.3 1.0
C04 A:FIJ602 2.7 64.3 1.0
O02 A:FIJ602 3.0 67.5 1.0
CB A:LEU90 3.6 44.8 1.0
CG2 A:THR92 3.7 47.6 1.0
CG2 A:VAL83 3.7 57.9 1.0
CA A:THR92 4.0 53.0 1.0
C03 A:FIJ602 4.0 63.3 1.0
CD1 A:ILE85 4.0 58.2 1.0
CD1 A:LEU90 4.0 51.5 1.0
C01 A:FIJ602 4.0 67.4 1.0
N A:THR92 4.2 42.3 1.0
O A:LEU90 4.2 50.1 1.0
CD1 A:LEU109 4.3 57.5 1.0
CB A:THR92 4.4 53.3 1.0
C A:LEU90 4.4 56.2 1.0
CG A:LEU90 4.5 53.4 1.0
C A:LEU91 4.5 52.1 1.0
C02 A:FIJ602 4.6 66.0 1.0
CA A:LEU90 4.7 50.3 1.0
CD A:PRO93 4.7 60.5 1.0
O A:LEU91 4.8 60.8 1.0
N A:LEU91 4.9 51.1 1.0

Chlorine binding site 2 out of 2 in 5f8p

Go back to Chlorine Binding Sites List in 5f8p
Chlorine binding site 2 out of 2 in the A Novel Inhibitor of the Obesity-Related Protein Fto


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of A Novel Inhibitor of the Obesity-Related Protein Fto within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl602

b:81.2
occ:1.00
CL A:FIJ602 0.0 81.2 1.0
C17 A:FIJ602 1.7 73.0 1.0
C16 A:FIJ602 2.7 70.3 1.0
C A:FIJ602 2.7 68.1 1.0
O03 A:FIJ602 3.0 61.4 1.0
CE1 A:TYR108 3.2 71.3 1.0
OH A:TYR108 3.2 74.7 1.0
CZ A:TYR108 3.2 73.8 1.0
O A:HOH768 3.5 48.9 1.0
CD2 A:HIS231 3.7 45.2 1.0
CD2 A:LEU109 3.9 50.8 1.0
C10 A:FIJ602 4.0 67.7 1.0
C15 A:FIJ602 4.0 72.5 1.0
CD1 A:TYR108 4.0 69.7 1.0
NE2 A:HIS231 4.1 44.1 1.0
O A:HOH704 4.1 63.2 1.0
CE2 A:TYR108 4.1 73.2 1.0
CG A:LEU109 4.2 55.3 1.0
CG A:HIS231 4.3 41.9 1.0
C11 A:FIJ602 4.5 70.8 1.0
CD1 A:LEU109 4.6 57.5 1.0
O1 A:AKG603 4.6 78.6 1.0
CG A:TYR108 4.7 66.7 1.0
CD2 A:TYR108 4.7 67.6 1.0
CE1 A:HIS231 4.8 43.1 1.0
ND1 A:HIS231 4.9 49.1 1.0
CB A:HIS231 5.0 36.5 1.0

Reference:

J.Chai, B.Zhou, W.Liu, Z.Han. Crystal Structure of Fto-Chtb To Be Published.
Page generated: Fri Jul 26 07:41:59 2024

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