Atomistry » Chlorine » PDB 5f5p-5fcu » 5f9x
Atomistry »
  Chlorine »
    PDB 5f5p-5fcu »
      5f9x »

Chlorine in PDB 5f9x: X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Cisplatin Upon 24 Hours of Incubation at 55 Degrees

Enzymatic activity of X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Cisplatin Upon 24 Hours of Incubation at 55 Degrees

All present enzymatic activity of X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Cisplatin Upon 24 Hours of Incubation at 55 Degrees:
3.2.1.17;

Protein crystallography data

The structure of X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Cisplatin Upon 24 Hours of Incubation at 55 Degrees, PDB code: 5f9x was solved by I.Russo Krauss, G.Ferraro, A.Pica, A.Merlino, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.15 / 1.94
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 77.990, 77.990, 36.930, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 24.8

Other elements in 5f9x:

The structure of X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Cisplatin Upon 24 Hours of Incubation at 55 Degrees also contains other interesting chemical elements:

Platinum (Pt) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Cisplatin Upon 24 Hours of Incubation at 55 Degrees (pdb code 5f9x). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Cisplatin Upon 24 Hours of Incubation at 55 Degrees, PDB code: 5f9x:

Chlorine binding site 1 out of 1 in 5f9x

Go back to Chlorine Binding Sites List in 5f9x
Chlorine binding site 1 out of 1 in the X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Cisplatin Upon 24 Hours of Incubation at 55 Degrees


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Structure of the Adduct Between Hen Egg White Lysozyme and Cisplatin Upon 24 Hours of Incubation at 55 Degrees within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:28.6
occ:0.30
 CL2 A:CPT202 0.0 28.6 0.3
PT1 A:CPT202 2.2 37.4 0.3
O A:HOH318 3.0 46.6 1.0
OD1 A:ASN93 3.1 35.2 1.0
ND1 A:HIS15 3.1 32.3 1.0
N2 A:CPT202 3.2 33.3 0.3
CG A:ASN93 3.6 33.1 1.0
ND2 A:ASN93 3.7 36.7 1.0
CG A:HIS15 3.7 28.4 1.0
CB A:HIS15 3.7 25.8 1.0
CG2 A:THR89 3.9 24.7 1.0
O A:HIS15 4.0 24.9 1.0
CE1 A:HIS15 4.0 33.7 1.0
NZ A:LYS96 4.2 20.0 1.0
CG1 A:VAL92 4.2 19.9 1.0
N1 A:CPT202 4.2 32.1 0.3
O A:THR89 4.2 19.9 1.0
CA A:HIS15 4.3 26.0 1.0
CB A:VAL92 4.6 18.6 1.0
CA A:THR89 4.6 22.6 1.0
C A:HIS15 4.6 24.5 1.0
CB A:THR89 4.8 23.9 1.0
N A:ASN93 4.8 22.2 1.0
CD2 A:HIS15 4.8 30.0 1.0
C A:THR89 4.8 21.2 1.0
CB A:ASN93 4.9 27.9 1.0
NE2 A:HIS15 5.0 30.1 1.0

Reference:

G.Ferraro, A.Pica, I.Russo Krauss, F.Pane, A.Amoresano, A.Merlino. Effect of Temperature on the Interaction of Cisplatin with the Model Protein Hen Egg White Lysozyme. J.Biol.Inorg.Chem. V. 21 433 2016.
ISSN: ESSN 1432-1327
PubMed: 27040953
DOI: 10.1007/S00775-016-1352-0
Page generated: Sat Dec 12 11:43:15 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy