Chlorine in PDB 5fa0: The Structure of the Beta-3-Deoxy-D-Manno-Oct-2-Ulosonic Acid Transferase Domain From Wbbb

The structure of The Structure of the Beta-3-Deoxy-D-Manno-Oct-2-Ulosonic Acid Transferase Domain From Wbbb, PDB code: 5fa0 was solved by E.Mallette, O.G.Ovchinnikova, C.Whitfield, M.S.Kimber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.47 / 2.30
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	82.930, 82.930, 120.710, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 22.9

The binding sites of Chlorine atom in the The Structure of the Beta-3-Deoxy-D-Manno-Oct-2-Ulosonic Acid Transferase Domain From Wbbb (pdb code 5fa0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Structure of the Beta-3-Deoxy-D-Manno-Oct-2-Ulosonic Acid Transferase Domain From Wbbb, PDB code: 5fa0:

Chlorine binding site 1 out of 1 in the The Structure of the Beta-3-Deoxy-D-Manno-Oct-2-Ulosonic Acid Transferase Domain From Wbbb


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of the Beta-3-Deoxy-D-Manno-Oct-2-Ulosonic Acid Transferase Domain From Wbbb within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl501 b:42.9 occ:1.00 O A:HOH867 2.4 42.8 1.0 O A:HOH716 3.0 19.3 1.0 N A:ASN244 3.1 21.1 1.0 CB A:ASN244 3.4 28.0 1.0 ND2 A:ASN244 3.5 27.1 1.0 CG A:GLU230 3.6 22.4 1.0 CG A:ASN244 3.6 26.1 1.0 CB A:THR243 3.8 28.6 1.0 CB A:GLU230 3.9 20.0 1.0 CA A:ASN244 3.9 23.0 1.0 O B:HOH738 3.9 25.3 1.0 O A:HOH894 3.9 19.4 1.0 C A:THR243 4.1 28.8 1.0 CD2 A:LEU235 4.1 20.9 1.0 CA A:THR243 4.2 25.9 1.0 CA A:GLU230 4.3 18.6 1.0 OD1 A:ASN244 4.5 25.8 1.0 OG1 A:THR243 4.5 28.2 1.0 O A:HOH640 4.5 24.7 1.0 N A:ILE245 4.6 25.8 1.0 CG2 A:THR243 4.7 25.1 1.0 O A:HOH656 4.8 22.1 1.0 C A:ASN244 4.8 25.0 1.0 O A:GLU230 4.9 19.8 1.0

O.G.Ovchinnikova, E.Mallette, A.Koizumi, T.L.Lowary, M.S.Kimber, C.Whitfield. Bacterial Beta-Kdo Glycosyltransferases Represent A New Glycosyltransferase Family (GT99). Proc. Natl. Acad. Sci. V. 113 E3120 2016U.S.A..
ISSN: ESSN 1091-6490
PubMed: 27199480
DOI: 10.1073/PNAS.1603146113