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Chlorine in PDB 5fae: N184K Pathological Variant of Gelsolin Domain 2 (Trigonal Form)

Protein crystallography data

The structure of N184K Pathological Variant of Gelsolin Domain 2 (Trigonal Form), PDB code: 5fae was solved by F.Boni, M.Milani, S.Ricagno, M.Bolognesi, M.De Rosa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.63 / 1.70
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 46.919, 46.919, 84.623, 90.00, 90.00, 120.00
R / Rfree (%) 18.2 / 22.5

Other elements in 5fae:

The structure of N184K Pathological Variant of Gelsolin Domain 2 (Trigonal Form) also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the N184K Pathological Variant of Gelsolin Domain 2 (Trigonal Form) (pdb code 5fae). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the N184K Pathological Variant of Gelsolin Domain 2 (Trigonal Form), PDB code: 5fae:

Chlorine binding site 1 out of 1 in 5fae

Go back to Chlorine Binding Sites List in 5fae
Chlorine binding site 1 out of 1 in the N184K Pathological Variant of Gelsolin Domain 2 (Trigonal Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of N184K Pathological Variant of Gelsolin Domain 2 (Trigonal Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl307

b:20.7
occ:1.00
ND1 A:HIS232 2.2 35.2 1.0
CE1 A:HIS232 3.1 38.2 1.0
CG A:HIS232 3.2 26.8 1.0
CB A:HIS232 3.6 24.4 1.0
O A:HOH469 4.0 31.8 1.0
NE2 A:HIS232 4.3 29.8 1.0
CD2 A:HIS232 4.3 24.0 1.0
CA A:HIS232 4.5 19.7 1.0

Reference:

F.Boni, M.Milani, R.Porcari, A.Barbiroli, S.Ricagno, M.De Rosa. Molecular Basis of A Novel Renal Amyloidosis Due to N184K Gelsolin Variant. Sci Rep V. 6 33463 2016.
ISSN: ESSN 2045-2322
PubMed: 27633054
DOI: 10.1038/SREP33463
Page generated: Sat Dec 12 11:43:19 2020

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