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Chlorine in PDB 5fbt: Crystal Structure of Rifampin Phosphotransferase Rph-Lm From Listeria Monocytogenes in Complex with Rifampin

Protein crystallography data

The structure of Crystal Structure of Rifampin Phosphotransferase Rph-Lm From Listeria Monocytogenes in Complex with Rifampin, PDB code: 5fbt was solved by P.J.Stogios, Z.Wawrzak, T.Skarina, V.Yim, A.Savchenko, W.F.Anderson, Centerfor Structural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.98 / 2.70
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 149.276, 149.276, 193.525, 90.00, 90.00, 120.00
R / Rfree (%) 22.3 / 26

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Rifampin Phosphotransferase Rph-Lm From Listeria Monocytogenes in Complex with Rifampin (pdb code 5fbt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Rifampin Phosphotransferase Rph-Lm From Listeria Monocytogenes in Complex with Rifampin, PDB code: 5fbt:

Chlorine binding site 1 out of 1 in 5fbt

Go back to Chlorine Binding Sites List in 5fbt
Chlorine binding site 1 out of 1 in the Crystal Structure of Rifampin Phosphotransferase Rph-Lm From Listeria Monocytogenes in Complex with Rifampin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Rifampin Phosphotransferase Rph-Lm From Listeria Monocytogenes in Complex with Rifampin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl902

b:46.2
occ:0.50
N A:LYS551 3.1 45.6 1.0
N A:ASN552 3.6 40.0 1.0
CA A:LYS551 3.9 38.0 1.0
OG1 A:THR550 3.9 47.6 1.0
C A:LYS551 3.9 33.2 1.0
O A:HOH1160 4.0 38.1 0.5
CB A:LYS551 4.0 39.0 1.0
C A:THR550 4.1 47.6 1.0
CA A:THR550 4.1 43.0 1.0
CB A:ASN552 4.3 35.4 1.0
CA A:ASN552 4.3 44.1 1.0
O A:HOH1059 4.5 55.6 1.0
CB A:THR550 4.6 42.5 1.0
O A:LYS551 4.7 39.2 1.0
CG A:LYS551 4.9 45.5 1.0

Reference:

P.J.Stogios, G.Cox, P.Spanogiannopoulos, M.C.Pillon, N.Waglechner, T.Skarina, K.Koteva, A.Guarne, A.Savchenko, G.D.Wright. Rifampin Phosphotransferase Is An Unusual Antibiotic Resistance Kinase. Nat Commun V. 7 11343 2016.
ISSN: ESSN 2041-1723
PubMed: 27103605
DOI: 10.1038/NCOMMS11343
Page generated: Sat Dec 12 11:43:29 2020

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