Atomistry » Chlorine » PDB 5f6x-5fdg » 5fcc
Atomistry »
  Chlorine »
    PDB 5f6x-5fdg »
      5fcc »

Chlorine in PDB 5fcc: Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition)

Protein crystallography data

The structure of Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition), PDB code: 5fcc was solved by J.M.Johnston, M.L.Gerth, E.N.Baker, J.S.Lott, P.B.Rainey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.87 / 1.94
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 81.998, 81.998, 169.901, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 23.6

Other elements in 5fcc:

The structure of Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition) also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition) (pdb code 5fcc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition), PDB code: 5fcc:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 5fcc

Go back to Chlorine Binding Sites List in 5fcc
Chlorine binding site 1 out of 4 in the Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:36.3
occ:1.00
O A:HOH327 3.0 27.6 1.0
O A:HOH346 3.0 30.4 1.0
O A:HOH359 3.1 37.3 1.0
O A:HOH347 3.4 41.1 1.0
NH2 A:ARG61 3.5 35.0 1.0
ND2 A:ASN110 3.7 33.8 1.0
CG2 A:ILE112 3.7 28.0 1.0
CB A:ILE112 3.8 30.9 1.0
CB A:ASN110 3.8 29.6 1.0
NE A:ARG61 3.9 35.8 1.0
CZ A:ARG61 4.0 39.7 1.0
CG A:ASN110 4.1 34.2 1.0
OG A:SER43 4.3 34.3 1.0
CD1 A:ILE112 4.3 33.8 1.0
CG1 A:ILE112 4.6 28.7 1.0
N A:ILE112 4.8 27.7 1.0
CA A:ILE112 4.8 23.0 1.0
C A:LEU111 4.9 30.9 1.0
O A:LEU111 4.9 29.2 1.0
CA A:ASN110 4.9 26.2 1.0
C A:ASN110 5.0 32.9 1.0
CD A:ARG61 5.0 30.4 1.0
NH1 A:ARG41 5.0 36.3 1.0

Chlorine binding site 2 out of 4 in 5fcc

Go back to Chlorine Binding Sites List in 5fcc
Chlorine binding site 2 out of 4 in the Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:51.6
occ:1.00
O1 A:EDO201 3.0 38.0 1.0
NH2 A:ARG61 3.3 35.0 1.0
NH1 A:ARG61 3.3 39.7 1.0
O A:HOH392 3.6 56.9 1.0
C1 A:EDO201 3.7 41.5 1.0
CZ A:ARG61 3.7 39.7 1.0
N A:SER54 3.8 55.8 1.0
CB A:PHE53 4.0 52.4 1.0
CA A:PHE53 4.2 56.0 1.0
CG A:PHE53 4.2 63.7 1.0
CB A:SER54 4.3 57.1 1.0
OG A:SER54 4.3 60.5 1.0
CD1 A:PHE53 4.3 63.6 1.0
CE1 A:PHE56 4.3 58.9 1.0
C A:PHE53 4.4 58.6 1.0
O A:SER54 4.4 58.0 1.0
CA A:SER54 4.5 61.9 1.0
C2 A:EDO201 4.7 42.2 1.0
CZ A:PHE56 4.9 60.9 1.0
CZ2 A:TRP17 4.9 57.9 1.0
CD2 A:PHE53 4.9 51.5 1.0
C A:SER54 4.9 61.0 1.0
ND2 A:ASN110 5.0 33.8 1.0

Chlorine binding site 3 out of 4 in 5fcc

Go back to Chlorine Binding Sites List in 5fcc
Chlorine binding site 3 out of 4 in the Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl202

b:51.7
occ:1.00
NH2 B:ARG61 3.1 38.6 1.0
O2 B:EDO201 3.2 43.1 1.0
NH1 B:ARG61 3.2 38.7 1.0
CZ B:ARG61 3.6 39.9 1.0
N B:SER54 3.7 49.7 1.0
C2 B:EDO201 3.7 45.1 1.0
CB B:PHE53 3.8 44.5 1.0
CG B:PHE53 4.1 43.9 1.0
CA B:PHE53 4.1 54.4 1.0
CE2 B:PHE56 4.2 41.1 1.0
OG B:SER54 4.2 57.9 1.0
CD1 B:PHE53 4.3 50.0 1.0
C B:PHE53 4.3 51.9 1.0
CB B:SER54 4.4 49.1 1.0
O B:SER54 4.4 47.2 1.0
CA B:SER54 4.5 48.8 1.0
C1 B:EDO201 4.6 41.7 1.0
CD2 B:PHE53 4.7 48.5 1.0
NE B:ARG61 4.9 35.8 1.0
C B:SER54 4.9 47.5 1.0
CZ B:PHE56 4.9 45.7 1.0

Chlorine binding site 4 out of 4 in 5fcc

Go back to Chlorine Binding Sites List in 5fcc
Chlorine binding site 4 out of 4 in the Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Structure of Hutd From Pseudomonas Fluorescens SBW25 (Nacl Condition) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:46.9
occ:1.00
O B:HOH318 3.0 32.0 1.0
O B:HOH351 3.1 31.4 1.0
ND2 B:ASN110 3.5 42.0 1.0
CG2 B:ILE112 3.6 34.0 1.0
NH2 B:ARG61 3.6 38.6 1.0
CB B:ASN110 3.7 33.1 1.0
CB B:ILE112 3.9 33.1 1.0
O B:HOH383 3.9 48.4 1.0
NE B:ARG61 4.0 35.8 1.0
CG B:ASN110 4.1 36.1 1.0
OG B:SER43 4.1 33.7 1.0
CZ B:ARG61 4.1 39.9 1.0
CD1 B:ILE112 4.4 35.8 1.0
CZ B:ARG41 4.4 68.5 1.0
NE B:ARG41 4.5 49.6 1.0
NH1 B:ARG41 4.5 57.0 1.0
NH2 B:ARG41 4.6 71.8 1.0
CG1 B:ILE112 4.8 36.2 1.0
N B:ILE112 4.8 27.9 1.0
CD B:ARG41 4.9 50.9 1.0
CA B:ASN110 4.9 27.2 1.0
CA B:ILE112 5.0 28.2 1.0
CE2 B:PHE56 5.0 41.1 1.0
CZ B:PHE56 5.0 45.7 1.0
C B:ASN110 5.0 32.5 1.0

Reference:

M.L.Gerth, Y.H.Liu, X.-X.Zhang, E.N.Baker, J.S.Lott, P.B.Rainey, J.M.Johnston. Structure of Hutd From Pseudomonas Fluorescens To Be Published.
Page generated: Fri Jul 26 07:46:02 2024

Last articles

Ca in 5M8D
Ca in 5M8E
Ca in 5M7G
Ca in 5M6C
Ca in 5M7E
Ca in 5M69
Ca in 5M6D
Ca in 5M5F
Ca in 5M3C
Ca in 5M2S
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy