Chlorine in PDB 5fda: The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A

Enzymatic activity of The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A

All present enzymatic activity of The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A:
1.5.1.3;

Protein crystallography data

The structure of The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A, PDB code: 5fda was solved by C.Chang, N.Maltseva, Y.Kim, M.Makowska-Grzyska, R.Mulligan, L.Papazisi, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.96 / 1.55
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 60.265, 79.201, 64.321, 90.00, 90.00, 90.00
R / Rfree (%) 15.7 / 19.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A (pdb code 5fda). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A, PDB code: 5fda:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 5fda

Go back to Chlorine Binding Sites List in 5fda
Chlorine binding site 1 out of 3 in the The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:10.1
occ:0.50
NZ A:LYS39 3.1 10.5 1.0
OD1 A:ASN35 3.4 12.2 1.0
CB A:ASN35 3.6 7.0 1.0
O A:HOH368 3.6 11.8 1.0
CE A:LYS39 3.8 9.8 1.0
CG A:ASN35 3.9 8.8 1.0
O A:ASN35 4.0 11.2 1.0
CA A:ASN35 4.4 7.0 1.0
OE1 A:GLU90 4.4 24.3 1.0
C A:ASN35 4.4 8.4 1.0
CL A:CL202 4.5 13.1 0.5
CE1 A:PHE32 4.8 10.4 1.0

Chlorine binding site 2 out of 3 in 5fda

Go back to Chlorine Binding Sites List in 5fda
Chlorine binding site 2 out of 3 in the The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:13.1
occ:0.50
O A:HOH417 3.1 16.6 1.0
ND2 A:ASN38 3.3 13.4 1.0
NZ A:LYS39 3.4 10.5 1.0
CE A:LYS39 3.5 9.8 1.0
OD1 A:ASN38 3.9 14.2 1.0
CG A:ASN38 4.0 11.6 1.0
CD A:LYS39 4.4 10.6 1.0
OE1 A:GLU90 4.4 24.3 1.0
CL A:CL201 4.5 10.1 0.5
CB A:GLU90 4.6 15.3 1.0
O A:HOH459 4.8 31.4 1.0
O A:HOH378 5.0 19.4 1.0

Chlorine binding site 3 out of 3 in 5fda

Go back to Chlorine Binding Sites List in 5fda
Chlorine binding site 3 out of 3 in the The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The High Resolution Structure of Apo Form Dihydrofolate Reductase From Yersinia Pestis at 1.55 A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:22.6
occ:0.50
O A:HOH424 3.1 29.7 1.0
O A:HOH304 3.1 28.0 0.5
N A:SER149 3.4 11.7 1.0
OG A:SER149 3.5 25.2 1.0
CE1 A:HIS24 3.8 18.1 1.0
CA A:ASN148 3.9 11.9 1.0
O A:ALA147 4.0 14.1 1.0
C A:ASN148 4.1 10.7 1.0
CB A:SER149 4.3 20.5 1.0
ND1 A:HIS24 4.4 18.4 1.0
CA A:SER149 4.4 14.7 1.0
O A:HOH360 4.4 22.5 1.0
N A:ASN148 4.6 10.1 1.0
C A:ALA147 4.6 11.7 1.0
NE2 A:HIS24 4.7 16.1 1.0
CB A:ASN148 4.9 13.4 1.0

Reference:

C.Chang, N.Maltseva, Y.Kim, M.Makowska-Grzyska, R.Mulligan, L.Papazisi, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). Structure of Dihydrofolate Reductase From Yersinia Pestis Complex with To Be Published.
Page generated: Sat Dec 12 11:43:38 2020

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