Atomistry » Chlorine » PDB 5fdg-5fjh » 5fjg
Atomistry »
  Chlorine »
    PDB 5fdg-5fjh »
      5fjg »

Chlorine in PDB 5fjg: The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5.

Protein crystallography data

The structure of The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5., PDB code: 5fjg was solved by K.L.Kim, S.K.Kwon, S.H.Jun, J.S.Cha, H.Y.Kim, J.H.Kim, H.S.Cho, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.670 / 2.00
Space group I 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 77.027, 49.434, 77.912, 90.00, 96.94, 90.00
R / Rfree (%) 16.68 / 21.91

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5. (pdb code 5fjg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5., PDB code: 5fjg:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 5fjg

Go back to Chlorine Binding Sites List in 5fjg
Chlorine binding site 1 out of 3 in the The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1267

b:38.3
occ:1.00
HD21 A:ASN98 2.2 27.1 1.0
HG1 A:THR102 2.3 29.3 1.0
HD1 A:TRP99 2.7 17.2 1.0
HG22 A:THR102 3.0 33.1 1.0
ND2 A:ASN98 3.0 22.6 1.0
OG1 A:THR102 3.1 24.4 1.0
HZ A:LYS235 3.2 25.4 1.0
HE3 A:LYS235 3.2 35.1 1.0
NZ A:LYS235 3.3 21.2 1.0
HB3 A:ALA61 3.3 24.2 1.0
HD22 A:ASN98 3.3 27.1 1.0
HB3 A:ASN98 3.4 23.2 1.0
HA A:ALA61 3.5 29.9 1.0
CD1 A:TRP99 3.5 14.4 1.0
HE1 A:TRP99 3.6 23.2 1.0
CG2 A:THR102 3.7 27.6 1.0
CE A:LYS235 3.7 29.3 1.0
H14 A:ANR1266 3.7 35.1 1.0
CB A:THR102 3.8 20.8 1.0
NE1 A:TRP99 3.9 19.4 1.0
HB2 A:ALA61 3.9 24.2 1.0
HG21 A:THR102 3.9 33.1 1.0
CB A:ALA61 3.9 20.1 1.0
HB A:THR102 4.0 24.9 1.0
CG A:ASN98 4.0 27.4 1.0
O A:HOH2049 4.1 23.9 1.0
CA A:ALA61 4.1 24.9 1.0
CB A:ASN98 4.1 19.3 1.0
HA A:TRP99 4.1 23.4 1.0
HD3 A:LYS235 4.2 23.0 1.0
C15 A:ANR1266 4.4 21.8 1.0
C A:ASN98 4.5 16.8 1.0
C14 A:ANR1266 4.5 29.2 1.0
HG23 A:THR102 4.5 33.1 1.0
O A:ASN98 4.6 21.1 1.0
HE2 A:LYS235 4.6 35.1 1.0
N A:TRP99 4.6 17.2 1.0
CD A:LYS235 4.6 19.1 1.0
HG13 A:ILE64 4.6 42.2 1.0
HB A:ILE64 4.7 34.5 1.0
N A:ALA61 4.7 20.9 1.0
CG A:TRP99 4.8 14.5 1.0
H A:TRP99 4.8 20.6 1.0
HB2 A:ASN98 4.8 23.2 1.0
CA A:TRP99 4.8 19.5 1.0
HB1 A:ALA61 4.8 24.2 1.0
O A:ARG95 4.9 17.6 1.0
HG22 A:ILE64 5.0 36.1 1.0

Chlorine binding site 2 out of 3 in 5fjg

Go back to Chlorine Binding Sites List in 5fjg
Chlorine binding site 2 out of 3 in the The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1268

b:42.1
occ:1.00
H A:LYS46 2.4 33.6 1.0
HB2 A:LYS46 2.6 46.5 1.0
HD2 A:PRO45 2.7 33.9 1.0
HB2 A:ALA44 2.9 31.7 1.0
N A:LYS46 3.1 28.0 1.0
HB3 A:LYS46 3.2 46.5 1.0
CB A:LYS46 3.2 38.8 1.0
HB2 A:PRO45 3.4 40.0 1.0
HE2 A:LYS46 3.4 58.2 1.0
CD A:PRO45 3.5 28.2 1.0
N A:PRO45 3.7 31.6 1.0
CA A:LYS46 3.7 32.1 1.0
CB A:ALA44 3.7 26.4 1.0
HB1 A:ALA44 3.8 31.7 1.0
HG2 A:PRO45 3.9 34.1 1.0
CB A:PRO45 4.0 33.3 1.0
CG A:PRO45 4.0 28.4 1.0
C A:PRO45 4.0 31.3 1.0
HA A:LYS46 4.1 38.5 1.0
CA A:PRO45 4.2 34.5 1.0
C A:ALA44 4.2 28.6 1.0
HD3 A:PRO45 4.2 33.9 1.0
CE A:LYS46 4.3 48.5 1.0
HD3 A:LYS46 4.3 57.1 1.0
HB3 A:ALA44 4.4 31.7 1.0
CG A:LYS46 4.5 44.7 1.0
CA A:ALA44 4.5 24.9 1.0
CD A:LYS46 4.6 47.6 1.0
HE3 A:LYS46 4.7 58.2 1.0
HA A:ALA44 4.8 29.9 1.0
O A:ALA44 4.8 26.1 1.0
H A:TYR47 4.9 28.1 1.0
HB3 A:PRO45 4.9 40.0 1.0
HG3 A:PRO45 5.0 34.1 1.0
HG3 A:LYS46 5.0 53.7 1.0

Chlorine binding site 3 out of 3 in 5fjg

Go back to Chlorine Binding Sites List in 5fjg
Chlorine binding site 3 out of 3 in the The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1277

b:44.5
occ:1.00
HG A:SER188 4.4 35.9 1.0
HB2 A:SER188 4.4 31.8 1.0
HB3 A:SER188 4.5 31.8 1.0
O A:HOH2080 4.8 34.3 1.0
CB A:SER188 4.9 26.5 1.0

Reference:

K.L.Kim, S.K.Kwon, S.H.Jun, J.S.Cha, H.Y.Kim, J.H.Kim, H.S.Cho. The Crystal Structure of Light-Driven Chloride Pump Clr in pH 4.5. To Be Published.
Page generated: Fri Jul 26 07:55:31 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy