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Chlorine in PDB 5fud: Oceanobacillus Iheyensis Macrodomain with Mes Bound

Protein crystallography data

The structure of Oceanobacillus Iheyensis Macrodomain with Mes Bound, PDB code: 5fud was solved by F.Gil-Ortiz, R.Zapata-Perez, A.B.Martinez, J.Juanhuix, A.Sanchez-Ferrer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 46.990, 96.740, 54.400, 90.00, 115.65, 90.00
R / Rfree (%) 17.1 / 21.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Oceanobacillus Iheyensis Macrodomain with Mes Bound (pdb code 5fud). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Oceanobacillus Iheyensis Macrodomain with Mes Bound, PDB code: 5fud:

Chlorine binding site 1 out of 1 in 5fud

Go back to Chlorine Binding Sites List in 5fud
Chlorine binding site 1 out of 1 in the Oceanobacillus Iheyensis Macrodomain with Mes Bound


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Oceanobacillus Iheyensis Macrodomain with Mes Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1187

b:48.4
occ:1.00
OD1 A:ASP99 3.2 33.0 1.0
CA A:THR97 3.7 24.0 1.0
C A:THR97 3.7 23.3 1.0
CG A:ASP99 3.8 30.7 1.0
N A:PRO98 3.8 23.7 1.0
N A:ASP99 3.9 25.2 1.0
CD A:PRO98 3.9 24.1 1.0
CB A:THR97 4.0 23.9 1.0
OD2 A:ASP99 4.1 33.0 1.0
O A:THR97 4.3 23.5 1.0
CG2 A:THR97 4.6 23.9 1.0
N A:LEU100 4.6 20.4 1.0
CA A:PRO98 4.7 24.6 1.0
C A:PRO98 4.7 24.2 1.0
CA A:ASP99 4.7 25.4 1.0
CB A:ASP99 4.8 28.8 1.0
CG A:LEU100 4.8 20.8 1.0
CG A:PRO98 4.9 24.2 1.0
CB A:PRO98 4.9 24.3 1.0

Reference:

R.Zapata-Perez, F.Gil-Ortiz, A.B.Martinez-Monino, A.G.Garcia-Saura, J.Juanhuix, A.Sanchez-Ferrer. Structural and Functional Analysis Ofoceanobacillus Iheyensismacrodomain Reveals A Network of Waters Involved in Substrate Binding and Catalysis. Open Biol V. 7 2017.
ISSN: ESSN 2046-2441
PubMed: 28446708
DOI: 10.1098/RSOB.160327
Page generated: Fri Jul 26 08:10:33 2024

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