Chlorine in PDB 5fvd: Human Metapneumovirus N0-P Complex

The structure of Human Metapneumovirus N0-P Complex, PDB code: 5fvd was solved by M.Renner, M.Bertinelli, C.Leyrat, G.C.Paesen, L.F.Saraiva De Oliveira, J.T.Huiskonen, J.M.Grimes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.42 / 1.86
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	40.930, 62.780, 86.710, 90.97, 96.38, 108.98
R / Rfree (%)	17.1 / 20.5

The binding sites of Chlorine atom in the Human Metapneumovirus N0-P Complex (pdb code 5fvd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Human Metapneumovirus N0-P Complex, PDB code: 5fvd:

Chlorine binding site 1 out of 1 in the Human Metapneumovirus N0-P Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Human Metapneumovirus N0-P Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1383 b:46.0 occ:1.00 O C:HOH2028 2.8 23.8 1.0 O C:LEU52 2.8 22.1 1.0 N C:ARG200 2.9 25.0 1.0 C C:TYR198 3.0 22.9 1.0 CA C:TYR198 3.1 22.8 1.0 CB C:TYR198 3.3 22.9 1.0 N C:PRO199 3.3 23.5 1.0 O C:TYR53 3.3 23.2 1.0 CB C:ARG200 3.4 27.2 1.0 O C:TYR198 3.4 25.4 1.0 CA C:ARG200 3.5 27.7 1.0 C C:TYR53 3.6 25.1 1.0 N C:MET201 3.6 28.7 1.0 CA C:TYR53 3.6 28.3 1.0 CD C:PRO199 3.7 26.3 1.0 C C:ARG200 3.7 29.4 1.0 C C:LEU52 3.8 24.7 1.0 CD1 C:TYR198 4.0 23.2 1.0 C C:PRO199 4.0 26.1 1.0 CG C:ARG200 4.1 26.5 1.0 CG C:TYR198 4.1 23.8 1.0 N C:TYR53 4.2 25.5 1.0 CA C:PRO199 4.2 25.9 1.0 O C:HOH2138 4.3 29.4 1.0 N C:ALA54 4.5 25.9 1.0 N C:TYR198 4.5 23.2 1.0 CD C:ARG200 4.5 27.6 1.0 CA C:MET201 4.5 29.2 1.0 O C:ARG200 4.6 27.9 1.0 CG C:PRO199 4.6 27.2 1.0 CB C:MET201 4.8 30.4 1.0 NH1 C:ARG200 4.8 29.3 1.0 O C:ARG197 4.8 23.9 1.0 CB C:TYR53 4.9 25.9 1.0 CD1 C:TYR53 4.9 23.3 1.0

M.Renner, M.Bertinelli, C.Leyrat, G.C.Paesen, L.F.Saraiva De Oliveira, J.T.Huiskonen, J.M.Grimes. Nucleocapsid Assembly in Pneumoviruses Is Regulated By Conformational Switching of the N Protein. Elife V. 5 12627 2016.
ISSN: ESSN 2050-084X
PubMed: 26880565
DOI: 10.7554/ELIFE.12627