Chlorine in PDB 5fwd: Crystal Structure of Mus Musculus Protein Arginine Methyltransferase 2 with CP2

Enzymatic activity of Crystal Structure of Mus Musculus Protein Arginine Methyltransferase 2 with CP2

All present enzymatic activity of Crystal Structure of Mus Musculus Protein Arginine Methyltransferase 2 with CP2:
2.1.1.125;

Protein crystallography data

The structure of Crystal Structure of Mus Musculus Protein Arginine Methyltransferase 2 with CP2, PDB code: 5fwd was solved by V.Cura, N.Troffer-Charlier, N.Marechal, L.Bonnefond, J.Cavarelli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	43.26 / 2.00
*Space group*	C 2 2 2₁
*Cell size a, b, c (Å), α, β, γ (°)*	65.964, 114.520, 132.085, 90.00, 90.00, 90.00
*R / R_free (%)*	18.8 / 20.9

Other elements in 5fwd:

The structure of Crystal Structure of Mus Musculus Protein Arginine Methyltransferase 2 with CP2 also contains other interesting chemical elements:

Calcium

(Ca)

2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Mus Musculus Protein Arginine Methyltransferase 2 with CP2 (pdb code 5fwd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Mus Musculus Protein Arginine Methyltransferase 2 with CP2, PDB code: 5fwd:

Chlorine binding site 1 out of 1 in 5fwd

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Chlorine Binding Sites List in 5fwd

Chlorine binding site 1 out of 1 in the Crystal Structure of Mus Musculus Protein Arginine Methyltransferase 2 with CP2

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Mus Musculus Protein Arginine Methyltransferase 2 with CP2 within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl1454 b:45.3 occ:1.00	O	A:HOH2206	3.4	50.7	1.0
	ND1	A:HIS377	3.4	36.5	1.0
	N	A:LEU376	3.5	29.2	1.0
	CA	A:GLY374	3.5	29.4	1.0
	CD	A:PRO375	3.6	29.4	1.0
	CB	A:LEU376	3.6	36.4	1.0
	C	A:GLY374	3.7	28.0	1.0
	N	A:PRO375	3.7	28.7	1.0
	CE1	A:HIS377	3.9	37.3	1.0
	CZ2	A:TRP354	4.0	31.7	1.0
	CA	A:LEU376	4.0	33.0	1.0
	CG	A:LEU376	4.2	40.6	1.0
	CG	A:PRO375	4.2	31.7	1.0
	CE2	A:TRP354	4.3	26.0	1.0
	NE1	A:TRP354	4.3	26.6	1.0
	CD1	A:LEU376	4.4	42.7	1.0
	O	A:GLY374	4.4	29.4	1.0
	N	A:HIS377	4.4	29.9	1.0
	N	A:GLY374	4.5	29.2	1.0
	OG	A:SER372	4.5	33.8	1.0
	C	A:PRO375	4.5	31.1	1.0
	C	A:LEU376	4.6	36.7	1.0
	CA	A:PRO375	4.7	29.2	1.0
	CG	A:HIS377	4.7	34.0	1.0
	CH2	A:TRP354	4.8	30.2	1.0
	O1	A:EDO1452	4.9	61.4	1.0

Reference:

V.Cura, N.Marechal, N.Troffer-Charlier, J.M.Strub, M.J.Van Haren, N.I.Martin, S.Cianferani, L.Bonnefond, J.Cavarelli. Structural Studies of Protein Arginine Methyltransferase 2 Reveal Its Interactions with Potential Substrates and Inhibitors. Febs J. V. 284 77 2017.
ISSN: ISSN 1742-464X
PubMed: 27879050
DOI: 10.1111/FEBS.13953

Page generated: Fri Jul 26 08:12:35 2024

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