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Chlorine in PDB 5g47: Structure of Gc Glycoprotein From Severe Fever with Thrombocytopenia Syndrome Virus in the Trimeric Postfusion Conformation

Protein crystallography data

The structure of Structure of Gc Glycoprotein From Severe Fever with Thrombocytopenia Syndrome Virus in the Trimeric Postfusion Conformation, PDB code: 5g47 was solved by S.Halldorsson, A.J.Behrens, K.Harlos, J.T.Huiskonen, R.M.Elliott, M.Crispin, B.Brennan, T.A.Bowden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 108.51 / 2.45
Space group I 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 147.360, 152.270, 160.380, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 23.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Gc Glycoprotein From Severe Fever with Thrombocytopenia Syndrome Virus in the Trimeric Postfusion Conformation (pdb code 5g47). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Gc Glycoprotein From Severe Fever with Thrombocytopenia Syndrome Virus in the Trimeric Postfusion Conformation, PDB code: 5g47:

Chlorine binding site 1 out of 1 in 5g47

Go back to Chlorine Binding Sites List in 5g47
Chlorine binding site 1 out of 1 in the Structure of Gc Glycoprotein From Severe Fever with Thrombocytopenia Syndrome Virus in the Trimeric Postfusion Conformation


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Gc Glycoprotein From Severe Fever with Thrombocytopenia Syndrome Virus in the Trimeric Postfusion Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1998

b:87.5
occ:1.00
N C:GLY773 3.2 44.7 1.0
N B:GLY773 3.2 52.1 1.0
N A:GLY773 3.3 47.5 1.0
CA B:SER772 3.6 54.0 1.0
CA C:SER772 3.6 55.7 1.0
CB C:SER772 3.6 55.0 1.0
CA A:SER772 3.7 51.1 1.0
CB B:SER772 3.7 62.0 1.0
CB A:SER772 3.7 48.1 1.0
C C:SER772 3.9 50.2 1.0
C B:SER772 3.9 58.8 1.0
C A:SER772 4.0 49.7 1.0
CA C:GLY773 4.2 52.1 1.0
CA B:GLY773 4.2 44.9 1.0
CA A:GLY773 4.3 45.8 1.0
O B:VAL771 4.8 57.3 1.0
O A:VAL771 4.8 54.3 1.0
O C:VAL771 4.8 64.7 1.0
OG C:SER772 4.9 67.3 1.0
N B:SER772 4.9 57.0 1.0
N C:SER772 4.9 52.1 1.0
OG B:SER772 5.0 64.9 1.0
OG A:SER772 5.0 57.8 1.0
N A:SER772 5.0 45.5 1.0
N B:LEU774 5.0 43.6 1.0

Reference:

S.Halldorsson, A.Behrens, K.Harlos, J.T.Huiskonen, R.M.Elliott, M.Crispin, B.Brennan, T.A.Bowden. Structure of A Phleboviral Envelope Glycoprotein Reveals A Consolidated Model of Membrane Fusion. Proc.Natl.Acad.Sci.Usa V. 113 7154 2016.
ISSN: ISSN 0027-8424
PubMed: 27325770
DOI: 10.1073/PNAS.1603827113
Page generated: Fri Jul 26 08:20:14 2024

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