Chlorine in PDB 5g4q: H.Pylori Beta Clamp in Complex with 5-Chloroisatin

Enzymatic activity of H.Pylori Beta Clamp in Complex with 5-Chloroisatin

All present enzymatic activity of H.Pylori Beta Clamp in Complex with 5-Chloroisatin:
2.7.7.7;

Protein crystallography data

The structure of H.Pylori Beta Clamp in Complex with 5-Chloroisatin, PDB code: 5g4q was solved by P.Pandey, S.Gourinath, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 80.00 / 2.30
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 82.311, 66.372, 89.119, 90.00, 115.96, 90.00
R / Rfree (%) 22.7 / 28.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the H.Pylori Beta Clamp in Complex with 5-Chloroisatin (pdb code 5g4q). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the H.Pylori Beta Clamp in Complex with 5-Chloroisatin, PDB code: 5g4q:

Chlorine binding site 1 out of 1 in 5g4q

Go back to Chlorine Binding Sites List in 5g4q
Chlorine binding site 1 out of 1 in the H.Pylori Beta Clamp in Complex with 5-Chloroisatin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of H.Pylori Beta Clamp in Complex with 5-Chloroisatin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1375

b:0.2
occ:1.00
CLA B:2HQ1375 0.0 0.2 1.0
CAA B:2HQ1375 1.7 0.5 1.0
CAF B:2HQ1375 2.7 0.7 1.0
CAB B:2HQ1375 2.7 0.7 1.0
CAE B:2HQ1375 4.0 0.7 1.0
CAC B:2HQ1375 4.0 0.2 1.0
CAD B:2HQ1375 4.5 0.5 1.0
CG2 B:ILE248 4.9 75.3 1.0
CG B:PRO347 5.0 59.6 1.0

Reference:

P.Pandey, V.Verma, S.K.Dhar, S.Gourinath. Screening of E. Coli Beta-Clamp Inhibitors Revealed That Few Inhibit Helicobacter Pylori More Effectively: Structural and Functional Characterization. Antibiotics (Basel) V. 7 2018.
ISSN: ESSN 2079-6382
PubMed: 29324718
DOI: 10.3390/ANTIBIOTICS7010005
Page generated: Sat Dec 12 11:46:32 2020

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