Chlorine in PDB 5hma: Crystal Structure of Mamo Protease Domain From Magnetospirillum Magneticum (Ni Bound Form)

The structure of Crystal Structure of Mamo Protease Domain From Magnetospirillum Magneticum (Ni Bound Form), PDB code: 5hma was solved by D.M.Hershey, X.Ren, J.H.Hurley, A.Komeili, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.67 / 2.30
Space group	P 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	129.163, 129.163, 129.163, 90.00, 90.00, 90.00
R / Rfree (%)	18.4 / 20.9

The structure of Crystal Structure of Mamo Protease Domain From Magnetospirillum Magneticum (Ni Bound Form) also contains other interesting chemical elements:

Nickel

(Ni)

1 atom

The binding sites of Chlorine atom in the Crystal Structure of Mamo Protease Domain From Magnetospirillum Magneticum (Ni Bound Form) (pdb code 5hma). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Mamo Protease Domain From Magnetospirillum Magneticum (Ni Bound Form), PDB code: 5hma:

Chlorine binding site 1 out of 1 in the Crystal Structure of Mamo Protease Domain From Magnetospirillum Magneticum (Ni Bound Form)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Mamo Protease Domain From Magnetospirillum Magneticum (Ni Bound Form) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl302 b:81.5 occ:1.00 O A:HOH434 2.8 79.3 1.0 N A:GLY103 3.1 56.6 1.0 CA A:GLY103 3.6 58.7 1.0 CG2 A:ILE101 3.6 55.6 1.0 CD A:PRO102 3.7 67.9 1.0 C A:ILE101 3.8 67.2 1.0 N A:PRO102 3.8 70.2 1.0 CA A:ILE101 4.0 63.1 1.0 CD2 A:HIS219 4.1 83.2 1.0 CG A:PRO102 4.1 63.1 1.0 CD2 A:HIS104 4.1 82.7 1.0 O A:ILE101 4.2 66.5 1.0 C A:PRO102 4.3 65.5 1.0 C A:GLY103 4.3 63.3 1.0 N A:HIS104 4.4 60.7 1.0 NE2 A:HIS219 4.4 75.7 1.0 CB A:ILE101 4.4 64.4 1.0 CA A:PRO102 4.5 64.4 1.0 NI A:NI301 4.7 95.9 1.0 NE2 A:HIS104 4.8 94.2 1.0 CB A:PRO102 5.0 67.3 1.0

D.M.Hershey, X.Ren, R.A.Melnyk, P.J.Browne, E.Ozyamak, S.R.Jones, M.C.Chang, J.H.Hurley, A.Komeili. Mamo Is A Repurposed Serine Protease That Promotes Magnetite Biomineralization Through Direct Transition Metal Binding in Magnetotactic Bacteria. Plos Biol. V. 14 02402 2016.
ISSN: ESSN 1545-7885
PubMed: 26981620
DOI: 10.1371/JOURNAL.PBIO.1002402