Chlorine in PDB 5hno: The Structure of the Kdo-Capped Saccharide Binding Subunit of the O-12 Specific Abc Transporter, Wzt

The structure of The Structure of the Kdo-Capped Saccharide Binding Subunit of the O-12 Specific Abc Transporter, Wzt, PDB code: 5hno was solved by E.Mallette, E.Mann, C.Whitfield, M.S.Kimber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.49 / 1.70
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	141.750, 53.550, 87.470, 90.00, 125.77, 90.00
R / Rfree (%)	18.3 / 21.6

The binding sites of Chlorine atom in the The Structure of the Kdo-Capped Saccharide Binding Subunit of the O-12 Specific Abc Transporter, Wzt (pdb code 5hno). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Structure of the Kdo-Capped Saccharide Binding Subunit of the O-12 Specific Abc Transporter, Wzt, PDB code: 5hno:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the The Structure of the Kdo-Capped Saccharide Binding Subunit of the O-12 Specific Abc Transporter, Wzt


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of the Kdo-Capped Saccharide Binding Subunit of the O-12 Specific Abc Transporter, Wzt within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl501 b:35.5 occ:1.00 H A:ILE310 2.6 28.2 1.0 H A:ALA319 2.8 47.4 1.0 HB2 A:LEU318 2.8 41.2 1.0 HB A:THR317 3.1 41.1 1.0 HG23 A:THR309 3.1 34.4 1.0 H A:LEU318 3.1 39.0 1.0 HA A:THR309 3.1 31.2 1.0 O A:HOH688 3.3 47.2 1.0 N A:ILE310 3.4 23.5 1.0 HB2 A:ALA319 3.5 51.0 1.0 N A:ALA319 3.5 39.5 1.0 N A:LEU318 3.6 32.5 1.0 CB A:LEU318 3.6 34.3 1.0 HB3 A:LEU318 3.8 41.2 1.0 O A:ILE310 3.9 25.1 1.0 HB A:ILE310 3.9 29.1 1.0 CA A:THR309 3.9 26.0 1.0 CG2 A:THR309 3.9 28.7 1.0 CA A:LEU318 4.0 33.5 1.0 CB A:THR317 4.0 34.3 1.0 HG22 A:THR309 4.1 34.4 1.0 HB3 A:ALA319 4.1 51.0 1.0 CB A:ALA319 4.1 42.5 1.0 C A:THR309 4.2 24.5 1.0 C A:LEU318 4.2 37.7 1.0 CA A:ILE310 4.3 25.1 1.0 O A:HOH680 4.4 60.5 1.0 CA A:ALA319 4.4 41.5 1.0 CB A:THR309 4.4 27.5 1.0 C A:THR317 4.5 31.7 1.0 HD12 A:LEU318 4.5 42.2 1.0 O A:LEU308 4.6 30.1 1.0 CB A:ILE310 4.6 24.3 1.0 C A:ILE310 4.6 24.9 1.0 HG13 A:ILE310 4.6 29.1 1.0 HG1 A:THR317 4.6 43.3 1.0 OG1 A:THR317 4.6 36.1 1.0 HG21 A:THR309 4.7 34.4 1.0 HA A:ALA319 4.7 49.8 1.0 HA A:THR317 4.7 38.4 1.0 OG1 A:THR309 4.7 32.1 1.0 CA A:THR317 4.7 32.0 1.0 CG A:LEU318 4.8 34.7 1.0 HG21 A:THR317 4.8 44.2 1.0 HG22 A:THR317 4.9 44.2 1.0 CG2 A:THR317 4.9 36.8 1.0 HG A:LEU318 4.9 41.7 1.0 O A:HOH643 4.9 47.1 1.0 HA A:LEU318 4.9 40.2 1.0

Chlorine binding site 2 out of 2 in the The Structure of the Kdo-Capped Saccharide Binding Subunit of the O-12 Specific Abc Transporter, Wzt


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of the Kdo-Capped Saccharide Binding Subunit of the O-12 Specific Abc Transporter, Wzt within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl501 b:40.1 occ:1.00 H C:LEU323 2.4 40.9 1.0 H C:ALA319 2.5 56.1 1.0 HH11 A:ARG379 2.7 42.3 1.0 HD22 C:LEU318 2.9 54.3 1.0 HB3 C:LEU323 3.0 38.5 1.0 HD3 A:ARG379 3.0 40.7 1.0 HA C:LEU318 3.1 55.0 1.0 O C:HOH685 3.1 29.1 1.0 N C:LEU323 3.2 34.1 1.0 HB3 C:LEU318 3.2 50.3 1.0 HA C:PRO322 3.3 37.8 1.0 N C:ALA319 3.3 46.7 1.0 O A:HOH694 3.3 49.1 1.0 NH1 A:ARG379 3.4 35.3 1.0 HB3 C:ALA319 3.5 56.9 1.0 HB2 C:ALA319 3.6 56.9 1.0 HD23 C:LEU318 3.7 54.3 1.0 HH12 A:ARG379 3.7 42.3 1.0 CB C:LEU323 3.7 32.1 1.0 CD2 C:LEU318 3.7 45.3 1.0 HB2 C:LEU323 3.7 38.5 1.0 CA C:LEU318 3.8 45.9 1.0 CB C:LEU318 3.9 41.9 1.0 CB C:ALA319 4.0 47.4 1.0 CD A:ARG379 4.0 33.9 1.0 CA C:LEU323 4.0 31.3 1.0 O C:LEU323 4.1 27.6 1.0 C C:LEU318 4.1 46.8 1.0 CA C:PRO322 4.1 31.5 1.0 C C:PRO322 4.1 35.6 1.0 HD2 A:ARG379 4.2 40.7 1.0 CA C:ALA319 4.3 48.3 1.0 HB2 A:ARG379 4.3 36.5 1.0 CG C:LEU318 4.4 42.0 1.0 CZ A:ARG379 4.4 33.1 1.0 HD21 C:LEU318 4.5 54.3 1.0 O C:LYS321 4.5 36.9 1.0 C C:LEU323 4.5 28.5 1.0 O A:HOH634 4.5 32.4 1.0 HD13 C:LEU318 4.6 48.9 1.0 NE A:ARG379 4.6 29.1 1.0 HB2 C:LEU318 4.7 50.3 1.0 HB3 C:PRO322 4.8 41.5 1.0 HA C:LEU323 4.8 37.6 1.0 HD23 C:LEU323 4.8 44.3 1.0 HB1 C:ALA319 4.9 56.9 1.0 HA C:ALA319 4.9 58.0 1.0 HG3 A:ARG379 4.9 39.2 1.0 CG A:ARG379 4.9 32.7 1.0

E.Mann, E.Mallette, B.R.Clarke, M.S.Kimber, C.Whitfield. The Klebsiella Pneumoniae O12 Atp-Binding Cassette (Abc) Transporter Recognizes the Terminal Residue of Its O-Antigen Polysaccharide Substrate. J.Biol.Chem. V. 291 9748 2016.
ISSN: ESSN 1083-351X
PubMed: 26934919
DOI: 10.1074/JBC.M116.719344