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Chlorine in PDB 5i0v: Iron and Copper-Bound P19 From Campylobacter Jejuni Under Oxidizing Conditions

Protein crystallography data

The structure of Iron and Copper-Bound P19 From Campylobacter Jejuni Under Oxidizing Conditions, PDB code: 5i0v was solved by A.C.Chan, M.E.Murphy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.00 / 1.65
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 54.220, 73.720, 74.850, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 21.2

Other elements in 5i0v:

The structure of Iron and Copper-Bound P19 From Campylobacter Jejuni Under Oxidizing Conditions also contains other interesting chemical elements:

Iron (Fe) 2 atoms
Copper (Cu) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Iron and Copper-Bound P19 From Campylobacter Jejuni Under Oxidizing Conditions (pdb code 5i0v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Iron and Copper-Bound P19 From Campylobacter Jejuni Under Oxidizing Conditions, PDB code: 5i0v:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5i0v

Go back to Chlorine Binding Sites List in 5i0v
Chlorine binding site 1 out of 2 in the Iron and Copper-Bound P19 From Campylobacter Jejuni Under Oxidizing Conditions


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Iron and Copper-Bound P19 From Campylobacter Jejuni Under Oxidizing Conditions within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:37.2
occ:1.00
NZ A:LYS10 3.1 31.7 1.0
N A:LYS151 3.5 23.5 1.0
N A:ASP8 3.5 26.5 1.0
CA A:TYR150 3.5 22.3 1.0
CA A:GLY7 3.6 22.5 1.0
O A:ASP149 4.0 22.9 1.0
CB A:TYR150 4.0 20.8 1.0
C A:TYR150 4.0 23.6 1.0
C A:GLY7 4.1 24.2 1.0
O A:LYS151 4.3 24.4 1.0
CD2 A:TYR150 4.3 20.9 1.0
O A:ASP8 4.4 26.1 1.0
CE A:LYS10 4.4 32.8 1.0
CA A:ASP8 4.6 28.8 1.0
OD2 A:ASP8 4.6 39.2 1.0
CG A:TYR150 4.6 21.4 1.0
CA A:LYS151 4.6 24.7 1.0
CB A:ASP8 4.6 31.6 1.0
N A:TYR150 4.6 22.0 1.0
C A:ASP149 4.8 23.4 1.0
CG A:ASP8 4.8 34.5 1.0
CB A:LYS151 4.9 26.9 1.0
N A:GLY7 4.9 22.7 1.0
C A:LYS151 4.9 24.7 1.0
C A:ASP8 5.0 27.2 1.0

Chlorine binding site 2 out of 2 in 5i0v

Go back to Chlorine Binding Sites List in 5i0v
Chlorine binding site 2 out of 2 in the Iron and Copper-Bound P19 From Campylobacter Jejuni Under Oxidizing Conditions


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Iron and Copper-Bound P19 From Campylobacter Jejuni Under Oxidizing Conditions within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl202

b:29.2
occ:1.00
N B:ASP8 3.4 19.4 1.0
NZ B:LYS10 3.4 23.4 1.0
N B:LYS151 3.5 20.4 1.0
CA B:TYR150 3.6 18.5 1.0
CA B:GLY7 3.8 20.0 1.0
C B:TYR150 4.0 19.8 1.0
C B:GLY7 4.1 20.2 1.0
O B:ASP149 4.1 20.3 1.0
CB B:TYR150 4.2 17.6 1.0
O B:ASP8 4.2 17.9 1.0
O B:LYS151 4.3 21.7 1.0
CA B:ASP8 4.3 19.7 1.0
CB B:ASP8 4.4 22.6 1.0
CD2 B:TYR150 4.4 16.9 1.0
CE B:LYS10 4.5 25.4 1.0
CA B:LYS151 4.6 21.8 1.0
OD2 B:ASP8 4.6 27.9 0.7
N B:TYR150 4.7 18.4 1.0
CG B:TYR150 4.7 16.8 1.0
CB B:LYS151 4.8 24.3 1.0
C B:ASP8 4.8 17.8 1.0
C B:ASP149 4.8 18.7 1.0
C B:LYS151 4.9 21.1 1.0

Reference:

A.C.Chan, D.Koch, G.Grass, M.E.Murphy, D.H.Nies. Metal-Handling and Receptor Recognition By Fetp and P19 From Uropathogenic Escherichia Coli and Campylobacter Jejuni To Be Published.
Page generated: Fri Jul 26 09:04:44 2024

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