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Chlorine in PDB 5i1c: Crystal Structure of Human Germline Antibody IGHV3-23/IGKV3-20

Protein crystallography data

The structure of Crystal Structure of Human Germline Antibody IGHV3-23/IGKV3-20, PDB code: 5i1c was solved by A.Teplyakov, G.Obmolova, T.Malia, J.Luo, G.Gilliland, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 2.25
Space group P 62 2 2
Cell size a, b, c (Å), α, β, γ (°) 121.460, 121.460, 160.390, 90.00, 90.00, 120.00
R / Rfree (%) 22 / 26.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Germline Antibody IGHV3-23/IGKV3-20 (pdb code 5i1c). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human Germline Antibody IGHV3-23/IGKV3-20, PDB code: 5i1c:

Chlorine binding site 1 out of 1 in 5i1c

Go back to Chlorine Binding Sites List in 5i1c
Chlorine binding site 1 out of 1 in the Crystal Structure of Human Germline Antibody IGHV3-23/IGKV3-20


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Germline Antibody IGHV3-23/IGKV3-20 within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cl902

b:73.8
occ:1.00
O H:HOH1091 3.3 50.5 1.0
N H:GLY53 3.4 51.6 1.0
CA H:GLY53 4.1 50.7 1.0
N H:ALA33 4.1 39.1 1.0
CB H:ALA33 4.4 33.7 1.0
C H:SER52 4.4 45.9 1.0
O H:SER31 4.4 55.7 1.0
CA H:SER52 4.5 47.1 1.0
CB H:SER52 4.5 41.5 1.0
CA H:ALA33 4.6 36.8 1.0
C H:TYR32 4.6 49.4 1.0
O H:HOH1053 4.7 41.6 1.0
CA H:TYR32 4.9 41.0 1.0

Reference:

A.Teplyakov, G.Obmolova, T.J.Malia, J.Luo, S.Muzammil, R.Sweet, J.C.Almagro, G.L.Gilliland. Structural Diversity in A Human Antibody Germline Library. Mabs V. 8 1045 2016.
ISSN: ESSN 1942-0870
PubMed: 27210805
DOI: 10.1080/19420862.2016.1190060
Page generated: Fri Jul 26 09:05:21 2024

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