Chlorine in PDB 5icw: Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A

All present enzymatic activity of Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A:
2.3.1.48; 2.3.1.88;

The structure of Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A, PDB code: 5icw was solved by S.I.Stove, R.S.Magin, R.Marmorstein, T.Arnesen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.25 / 1.95
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	63.840, 84.298, 68.485, 90.00, 91.10, 90.00
R / Rfree (%)	20.7 / 25.5

The binding sites of Chlorine atom in the Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A (pdb code 5icw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A, PDB code: 5icw:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl202 b:31.5 occ:1.00 O A:HOH342 2.9 32.9 1.0 ND2 A:ASN143 3.1 25.1 1.0 N A:LEU140 3.3 21.4 1.0 CG2 A:VAL139 3.6 26.9 1.0 CB A:ASN143 3.8 26.7 1.0 CA A:VAL139 3.8 22.1 1.0 CG A:LEU140 3.9 27.8 1.0 CD1 B:ILE167 3.9 28.7 1.0 CB A:LEU140 3.9 27.7 1.0 CG A:ASN143 3.9 28.3 1.0 C A:VAL139 4.0 22.3 1.0 CA A:LEU140 4.2 26.7 1.0 CB A:VAL139 4.3 26.8 1.0 CD1 A:LEU140 4.4 30.6 1.0 C3P A:COA201 4.6 31.1 1.0 O A:HIS138 4.8 21.2 1.0 CG1 B:ILE167 4.8 27.1 1.0 O A:LEU140 4.8 22.9 1.0 CB B:ILE167 4.8 31.9 1.0

Chlorine binding site 2 out of 4 in the Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl202 b:27.9 occ:1.00 O B:HOH348 3.0 26.0 1.0 ND2 B:ASN143 3.2 22.6 1.0 N B:LEU140 3.3 23.0 1.0 CG1 A:ILE167 3.7 28.8 1.0 CG2 B:VAL139 3.7 23.4 1.0 CG B:LEU140 3.8 28.5 1.0 CA B:VAL139 3.8 20.0 1.0 CB B:ASN143 3.8 28.1 1.0 CB B:LEU140 3.9 27.2 1.0 CG B:ASN143 4.0 26.8 1.0 C B:VAL139 4.1 23.6 1.0 CA B:LEU140 4.2 23.1 1.0 CD1 A:ILE167 4.3 32.7 1.0 CB B:VAL139 4.3 23.9 1.0 C3P B:COA201 4.3 33.4 1.0 CD1 B:LEU140 4.4 27.0 1.0 O B:HIS138 4.7 20.3 1.0 CG2 A:ILE167 4.8 24.9 1.0 O B:LEU140 4.8 21.4 1.0 CB A:ILE167 4.8 27.8 1.0

Chlorine binding site 3 out of 4 in the Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl202 b:24.8 occ:1.00 ND2 C:ASN143 3.1 26.6 1.0 N C:LEU140 3.3 22.4 1.0 S1P C:COA201 3.5 54.7 1.0 C2P C:COA201 3.6 31.7 1.0 CG C:LEU140 3.6 27.9 1.0 CB C:ASN143 3.8 21.1 1.0 CB C:LEU140 3.8 22.8 1.0 CG2 C:VAL139 3.8 23.6 1.0 CG C:ASN143 4.0 24.6 1.0 CA C:VAL139 4.0 21.3 1.0 CD1 C:LEU140 4.1 28.9 1.0 C C:VAL139 4.1 21.6 1.0 CA C:LEU140 4.2 25.8 1.0 CB C:VAL139 4.5 24.3 1.0 O C:LEU140 4.9 22.0 1.0 O C:HIS138 4.9 21.4 1.0 CD2 C:LEU140 4.9 27.5 1.0 O5P C:COA201 5.0 30.8 1.0

Chlorine binding site 4 out of 4 in the Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Human Natf (HNAA60) Homodimer Bound to Coenzyme A within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl202 b:26.9 occ:1.00 O D:HOH369 2.8 48.6 1.0 ND2 D:ASN143 3.2 22.1 1.0 N D:LEU140 3.2 21.6 1.0 CG2 D:VAL139 3.7 25.0 1.0 CG D:LEU140 3.8 29.4 1.0 CA D:VAL139 3.8 22.5 1.0 CB D:LEU140 3.9 22.3 1.0 CB D:ASN143 3.9 17.8 1.0 C D:VAL139 4.0 24.0 1.0 CG D:ASN143 4.0 22.7 1.0 CA D:LEU140 4.1 24.6 1.0 C3P D:COA201 4.2 33.3 1.0 CB D:VAL139 4.3 27.3 1.0 CD1 D:LEU140 4.4 25.7 1.0 O D:HIS138 4.7 21.6 1.0 O D:LEU140 4.9 19.6 1.0 O5P D:COA201 4.9 27.4 1.0 N D:VAL139 5.0 21.1 1.0

S.I.Stve, R.S.Magin, H.Foyn, B.E.Haug, R.Marmorstein, T.Arnesen. Crystal Structure of the Golgi-Associated Human N Alpha-Acetyltransferase 60 Reveals the Molecular Determinants For Substrate-Specific Acetylation. Structure V. 24 1044 2016.
ISSN: ISSN 0969-2126
PubMed: 27320834
DOI: 10.1016/J.STR.2016.04.020