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Chlorine in PDB 5ikm: 1.9 Angstrom Crystal Structure of NS5 Methyl Transferase From Dengue Virus 1 in Complex with S-Adenosylmethionine and Beta-D- Fructopyranose.

Protein crystallography data

The structure of 1.9 Angstrom Crystal Structure of NS5 Methyl Transferase From Dengue Virus 1 in Complex with S-Adenosylmethionine and Beta-D- Fructopyranose., PDB code: 5ikm was solved by G.Minasov, L.Shuvalova, J.Winsor, I.Dubrovska, K.Flores, S.Shatsman, K.Kwon, W.F.Anderson, Center For Structural Genomics Of Infectiousdiseases, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.19 / 1.90
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 58.380, 86.230, 144.307, 90.00, 90.00, 90.00
R / Rfree (%) 15.3 / 18.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 1.9 Angstrom Crystal Structure of NS5 Methyl Transferase From Dengue Virus 1 in Complex with S-Adenosylmethionine and Beta-D- Fructopyranose. (pdb code 5ikm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the 1.9 Angstrom Crystal Structure of NS5 Methyl Transferase From Dengue Virus 1 in Complex with S-Adenosylmethionine and Beta-D- Fructopyranose., PDB code: 5ikm:

Chlorine binding site 1 out of 1 in 5ikm

Go back to Chlorine Binding Sites List in 5ikm
Chlorine binding site 1 out of 1 in the 1.9 Angstrom Crystal Structure of NS5 Methyl Transferase From Dengue Virus 1 in Complex with S-Adenosylmethionine and Beta-D- Fructopyranose.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 1.9 Angstrom Crystal Structure of NS5 Methyl Transferase From Dengue Virus 1 in Complex with S-Adenosylmethionine and Beta-D- Fructopyranose. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:53.8
occ:1.00
O A:HOH526 3.3 22.1 1.0
N A:ASN226 3.4 19.3 1.0
O A:HOH548 3.4 48.0 1.0
CA A:GLY225 3.8 18.7 1.0
CB A:ASN226 4.0 21.3 1.0
C A:GLY225 4.1 18.9 1.0
CA A:ASN226 4.3 19.8 1.0
O A:ASN226 5.0 17.7 1.0

Reference:

G.Minasov, L.Shuvalova, J.Winsor, I.Dubrovska, K.Flores, S.Shatsman, K.Kwon, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases. 1.9 Angstrom Crystal Structure of NS5 Methyl Transferase From Dengue Virus 1 in Complex with S-Adenosylmethionine and Beta-D-Fructopyranose. To Be Published.
Page generated: Sat Dec 12 11:50:54 2020

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