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Chlorine in PDB 5j3b: Structure of Translation Elongation Factor P From Acinetobacter Baumannii

Protein crystallography data

The structure of Structure of Translation Elongation Factor P From Acinetobacter Baumannii, PDB code: 5j3b was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.03 / 2.30
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 130.760, 52.230, 90.170, 90.00, 130.62, 90.00
R / Rfree (%) 19.3 / 23.7

Other elements in 5j3b:

The structure of Structure of Translation Elongation Factor P From Acinetobacter Baumannii also contains other interesting chemical elements:

Potassium (K) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Translation Elongation Factor P From Acinetobacter Baumannii (pdb code 5j3b). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Translation Elongation Factor P From Acinetobacter Baumannii, PDB code: 5j3b:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5j3b

Go back to Chlorine Binding Sites List in 5j3b
Chlorine binding site 1 out of 2 in the Structure of Translation Elongation Factor P From Acinetobacter Baumannii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Translation Elongation Factor P From Acinetobacter Baumannii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:1.0
occ:1.00
N A:PRO167 3.6 60.0 1.0
CD A:PRO167 3.6 57.0 1.0
O A:ARG165 3.7 42.7 1.0
C A:VAL166 3.7 58.2 1.0
CD2 A:TYR185 3.8 46.7 1.0
CA A:VAL166 3.8 47.8 1.0
CG A:PRO167 3.9 59.7 1.0
C A:ARG165 4.1 47.9 1.0
N A:VAL166 4.2 49.6 1.0
O A:VAL166 4.3 53.7 1.0
CA A:PRO167 4.3 61.2 1.0
CG A:TYR185 4.3 47.1 1.0
CB A:TYR185 4.4 45.6 1.0
CE2 A:TYR185 4.5 48.7 1.0
O A:HOH309 4.6 50.1 1.0
CB A:PRO167 4.8 57.4 1.0
CB A:ARG165 4.8 52.3 1.0

Chlorine binding site 2 out of 2 in 5j3b

Go back to Chlorine Binding Sites List in 5j3b
Chlorine binding site 2 out of 2 in the Structure of Translation Elongation Factor P From Acinetobacter Baumannii


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Translation Elongation Factor P From Acinetobacter Baumannii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl201

b:0.0
occ:1.00
O B:ARG165 3.4 42.4 1.0
N B:PRO167 3.8 47.1 1.0
CD B:PRO167 3.8 46.7 1.0
C B:VAL166 3.8 50.6 1.0
C B:ARG165 3.8 51.4 1.0
CA B:VAL166 3.9 50.0 1.0
CD2 B:TYR185 4.0 48.7 1.0
CG B:ARG165 4.0 53.0 1.0
N B:VAL166 4.1 50.9 1.0
CG B:PRO167 4.1 56.6 1.0
O B:HOH302 4.2 50.2 1.0
CB B:TYR185 4.3 40.9 1.0
CG B:TYR185 4.4 45.3 1.0
CD B:ARG165 4.4 68.4 1.0
O B:VAL166 4.4 48.1 1.0
CB B:ARG165 4.5 49.2 1.0
CA B:PRO167 4.6 61.0 1.0
NE B:ARG165 4.7 85.3 1.0
CE2 B:TYR185 4.8 57.3 1.0
CA B:ARG165 4.8 41.5 1.0
CB B:PRO167 5.0 59.6 1.0

Reference:

J.Abendroth, P.S.Horanyi, D.D.Lorimer, T.E.Edwards. Structure of Translation Elongation Factor P From Acinetobacter Baumannii To Be Published.
Page generated: Sat Dec 12 11:52:10 2020

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