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Chlorine in PDB 5jcv: Sortase B From Listeria Monocytogenes.

Protein crystallography data

The structure of Sortase B From Listeria Monocytogenes., PDB code: 5jcv was solved by J.Osipiuk, M.Zhou, S.Grimshaw, W.F.Anderson, A.Joachimiak, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.60 / 2.23
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 70.155, 70.155, 224.471, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 24.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Sortase B From Listeria Monocytogenes. (pdb code 5jcv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Sortase B From Listeria Monocytogenes., PDB code: 5jcv:

Chlorine binding site 1 out of 1 in 5jcv

Go back to Chlorine Binding Sites List in 5jcv
Chlorine binding site 1 out of 1 in the Sortase B From Listeria Monocytogenes.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Sortase B From Listeria Monocytogenes. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:82.3
occ:1.00
OG1 A:THR179 3.0 77.2 1.0
N A:THR179 3.3 67.8 1.0
N A:THR180 3.4 65.1 1.0
OG1 A:THR178 3.6 59.7 1.0
OG1 A:THR180 3.7 61.2 1.0
N A:ASP181 3.8 61.0 1.0
CA A:THR179 4.0 68.3 1.0
CA A:THR178 4.0 60.0 1.0
CB A:THR179 4.1 70.7 1.0
C A:THR178 4.1 64.1 1.0
CB A:ASP181 4.2 68.3 1.0
C A:THR179 4.2 68.2 1.0
CA A:THR180 4.3 63.8 1.0
CB A:THR178 4.4 58.4 1.0
C A:THR180 4.5 62.8 1.0
CB A:THR180 4.6 62.8 1.0
CA A:ASP181 4.7 65.8 1.0

Reference:

J.Osipiuk, M.Zhou, S.Grimshaw, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). Sortase B From Listeria Monocytogenes. To Be Published.
Page generated: Sat Dec 12 11:52:44 2020

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