Atomistry » Chlorine » PDB 5jed-5jkb » 5jk0
Atomistry »
  Chlorine »
    PDB 5jed-5jkb »
      5jk0 »

Chlorine in PDB 5jk0: Crystal Structure of Xerh Site-Specific Recombinase Bound to Difh Substrate: Pre-Cleavage Complex

Protein crystallography data

The structure of Crystal Structure of Xerh Site-Specific Recombinase Bound to Difh Substrate: Pre-Cleavage Complex, PDB code: 5jk0 was solved by A.Bebel, O.Barabas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.89 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 79.280, 153.200, 169.390, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 22.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Xerh Site-Specific Recombinase Bound to Difh Substrate: Pre-Cleavage Complex (pdb code 5jk0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Xerh Site-Specific Recombinase Bound to Difh Substrate: Pre-Cleavage Complex, PDB code: 5jk0:

Chlorine binding site 1 out of 1 in 5jk0

Go back to Chlorine Binding Sites List in 5jk0
Chlorine binding site 1 out of 1 in the Crystal Structure of Xerh Site-Specific Recombinase Bound to Difh Substrate: Pre-Cleavage Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Xerh Site-Specific Recombinase Bound to Difh Substrate: Pre-Cleavage Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:36.2
occ:1.00
O C:HOH569 3.1 25.5 1.0
N C:LEU326 3.3 23.5 1.0
N A:LEU326 3.4 26.8 1.0
CB C:LEU326 3.7 28.6 1.0
O C:HIS324 3.8 30.2 1.0
O A:HIS324 3.8 33.9 1.0
CB A:LEU326 4.0 29.2 1.0
CA A:ASP325 4.0 29.9 1.0
CA C:ASP325 4.1 26.7 1.0
CA C:LEU326 4.1 25.4 1.0
C C:ASP325 4.2 24.1 1.0
C A:ASP325 4.2 27.0 1.0
CA A:LEU326 4.3 27.1 1.0
OD1 A:ASP325 4.4 32.9 1.0
OD1 C:ASP325 4.6 25.7 1.0
C C:HIS324 4.6 30.9 1.0
C A:HIS324 4.6 32.5 1.0
N C:ASP325 4.8 28.4 1.0
N A:ASP325 4.8 30.5 1.0
N A:ILE327 4.9 26.8 1.0
N C:ILE327 4.9 23.8 1.0
CG A:ASP325 5.0 34.0 1.0
CG C:LEU326 5.0 29.9 1.0

Reference:

A.Bebel, E.Karaca, B.Kumar, W.M.Stark, O.Barabas. Structural Snapshots of Xer Recombination Reveal Activation By Synaptic Complex Remodeling and Dna Bending. Elife V. 5 2016.
ISSN: ESSN 2050-084X
PubMed: 28009253
DOI: 10.7554/ELIFE.19706
Page generated: Fri Jul 26 10:06:02 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy