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Chlorine in PDB 5jph: Structure of A Gnat Acetyltransferase SACOL1063 From Staphylococcus Aureus in Complex with Coa

Protein crystallography data

The structure of Structure of A Gnat Acetyltransferase SACOL1063 From Staphylococcus Aureus in Complex with Coa, PDB code: 5jph was solved by K.A.Majorek, T.Osinski, W.F.Anderson, W.Minor, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.46
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 50.088, 93.821, 68.910, 90.00, 97.15, 90.00
R / Rfree (%) 14.2 / 17

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of A Gnat Acetyltransferase SACOL1063 From Staphylococcus Aureus in Complex with Coa (pdb code 5jph). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Structure of A Gnat Acetyltransferase SACOL1063 From Staphylococcus Aureus in Complex with Coa, PDB code: 5jph:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 5jph

Go back to Chlorine Binding Sites List in 5jph
Chlorine binding site 1 out of 3 in the Structure of A Gnat Acetyltransferase SACOL1063 From Staphylococcus Aureus in Complex with Coa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of A Gnat Acetyltransferase SACOL1063 From Staphylococcus Aureus in Complex with Coa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:30.1
occ:1.00
ND1 A:HIS43 2.8 15.7 1.0
NH2 A:ARG18 3.0 15.2 1.0
OG1 A:THR55 3.4 15.6 1.0
CD A:ARG18 3.5 13.8 1.0
CB A:CYS14 3.6 13.9 1.0
CE1 A:HIS43 3.6 15.5 1.0
CB A:ARG57 3.9 17.9 1.0
O A:ALA56 3.9 13.9 1.0
CG A:HIS43 3.9 16.6 1.0
CZ A:ARG18 3.9 15.1 1.0
C A:ALA56 4.0 13.8 1.0
SG A:CYS14 4.1 15.2 1.0
NE A:ARG18 4.1 13.8 1.0
CB A:HIS43 4.2 16.2 1.0
N A:ARG57 4.3 12.8 1.0
CB A:ARG70 4.4 13.1 1.0
CA A:ARG57 4.5 14.7 1.0
CG2 A:THR55 4.6 16.0 1.0
CB A:THR55 4.6 14.5 1.0
CG A:ARG57 4.6 17.3 1.0
CG A:ARG18 4.7 14.1 1.0
CD A:ARG57 4.7 17.1 1.0
CA A:ALA56 4.7 13.9 1.0
N A:ALA56 4.7 13.1 1.0
CA A:CYS14 4.8 13.6 1.0
CG A:ARG70 4.8 14.1 1.0
NE2 A:HIS43 4.8 16.2 1.0
C A:CYS14 5.0 14.2 1.0
OE1 A:GLU38 5.0 16.2 1.0
CD2 A:HIS43 5.0 16.8 1.0

Chlorine binding site 2 out of 3 in 5jph

Go back to Chlorine Binding Sites List in 5jph
Chlorine binding site 2 out of 3 in the Structure of A Gnat Acetyltransferase SACOL1063 From Staphylococcus Aureus in Complex with Coa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of A Gnat Acetyltransferase SACOL1063 From Staphylococcus Aureus in Complex with Coa within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:32.2
occ:1.00
ND1 B:HIS43 2.8 17.0 1.0
NH1 B:ARG18 3.0 16.2 1.0
OG1 B:THR55 3.4 15.9 1.0
CD B:ARG18 3.4 14.6 1.0
CB B:CYS14 3.6 15.7 1.0
CE1 B:HIS43 3.7 17.2 1.0
O B:ALA56 3.8 15.7 1.0
CB B:ARG57 3.9 18.6 1.0
CG B:HIS43 3.9 16.8 1.0
CZ B:ARG18 4.0 14.7 1.0
C B:ALA56 4.0 14.4 1.0
SG B:CYS14 4.1 16.7 1.0
NE B:ARG18 4.1 14.7 1.0
CB B:HIS43 4.2 15.9 1.0
N B:ARG57 4.3 14.5 1.0
CB B:ARG70 4.5 12.8 1.0
CA B:ARG57 4.5 15.1 1.0
CG2 B:THR55 4.6 16.1 1.0
CB B:THR55 4.6 15.4 1.0
CG B:ARG18 4.6 13.2 1.0
CG B:ARG57 4.6 18.7 1.0
N B:ALA56 4.7 13.4 1.0
CA B:ALA56 4.7 13.8 1.0
CD B:ARG57 4.7 17.9 1.0
CA B:CYS14 4.8 15.1 1.0
NE2 B:HIS43 4.9 16.5 1.0
CG B:ARG70 4.9 14.6 1.0
CA B:HIS43 5.0 16.3 1.0

Chlorine binding site 3 out of 3 in 5jph

Go back to Chlorine Binding Sites List in 5jph
Chlorine binding site 3 out of 3 in the Structure of A Gnat Acetyltransferase SACOL1063 From Staphylococcus Aureus in Complex with Coa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of A Gnat Acetyltransferase SACOL1063 From Staphylococcus Aureus in Complex with Coa within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl203

b:34.2
occ:1.00
ND1 C:HIS43 2.9 18.5 1.0
NH1 C:ARG18 2.9 18.2 1.0
CD C:ARG18 3.4 17.9 1.0
OG1 C:THR55 3.4 15.3 1.0
CB C:CYS14 3.6 16.2 1.0
CE1 C:HIS43 3.7 17.3 1.0
O C:ALA56 3.9 15.1 1.0
CG C:HIS43 3.9 17.5 1.0
CZ C:ARG18 3.9 18.3 1.0
CB C:ARG57 3.9 20.0 1.0
C C:ALA56 4.0 15.2 1.0
SG C:CYS14 4.1 16.7 1.0
NE C:ARG18 4.1 17.7 1.0
CB C:HIS43 4.2 17.7 1.0
N C:ARG57 4.3 14.4 1.0
CB C:ARG70 4.4 15.0 1.0
CA C:ARG57 4.6 15.8 1.0
CB C:THR55 4.6 14.1 1.0
CG C:ARG18 4.6 16.4 1.0
CG2 C:THR55 4.6 16.5 1.0
CG C:ARG57 4.6 19.8 1.0
CD C:ARG57 4.7 18.1 1.0
N C:ALA56 4.7 13.3 1.0
CA C:ALA56 4.7 14.1 1.0
CA C:CYS14 4.8 15.4 1.0
CG C:ARG70 4.8 16.7 1.0
NE2 C:HIS43 4.9 20.1 1.0
C C:CYS14 5.0 15.7 1.0
CA C:HIS43 5.0 16.2 1.0

Reference:

K.A.Majorek, T.Osinski, D.T.Tran, A.Revilla, W.F.Anderson, W.Minor, M.L.Kuhn. Insight Into the 3D Structure and Substrate Specificity of Previously Uncharacterized Gnat Superfamily Acetyltransferases From Pathogenic Bacteria. Biochim.Biophys.Acta V.1865 55 2016.
ISSN: ISSN 0006-3002
PubMed: 27783928
DOI: 10.1016/J.BBAPAP.2016.10.011
Page generated: Fri Jul 26 10:10:32 2024

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