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Chlorine in PDB 5jzk: The Structure of Ultra Stable Green Fluorescent Protein

Protein crystallography data

The structure of The Structure of Ultra Stable Green Fluorescent Protein, PDB code: 5jzk was solved by K.J.Yong, N.J.Gunn, D.J.Scott, M.D.W.Griffin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.22 / 1.90
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 137.182, 137.182, 147.647, 90.00, 90.00, 120.00
R / Rfree (%) 14.2 / 17.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of Ultra Stable Green Fluorescent Protein (pdb code 5jzk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Structure of Ultra Stable Green Fluorescent Protein, PDB code: 5jzk:

Chlorine binding site 1 out of 1 in 5jzk

Go back to Chlorine Binding Sites List in 5jzk
Chlorine binding site 1 out of 1 in the The Structure of Ultra Stable Green Fluorescent Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of Ultra Stable Green Fluorescent Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:39.9
occ:1.00
O A:HOH522 3.0 36.5 1.0
O A:HOH455 3.0 28.1 1.0
O A:HOH525 3.0 32.9 1.0
N A:TRP57 3.1 22.1 1.0
CB A:TRP57 3.6 22.6 1.0
CD1 A:TRP57 3.7 23.6 1.0
CD A:PRO58 3.7 21.9 1.0
CA A:PRO56 3.8 22.2 1.0
C A:PRO56 3.9 23.4 1.0
CA A:TRP57 3.9 21.6 1.0
CD1 A:TYR143 4.0 26.3 1.0
CG A:TRP57 4.0 21.2 1.0
CB A:PRO56 4.2 22.9 1.0
CE1 A:TYR143 4.6 27.0 1.0
O A:HOH469 4.6 26.0 1.0
O A:HOH603 4.6 46.2 1.0
N A:PRO58 4.7 21.5 1.0
CG A:PRO58 4.9 23.9 1.0
C A:TRP57 4.9 20.9 1.0
NE1 A:TRP57 4.9 24.7 1.0

Reference:

D.J.Scott, N.J.Gunn, K.J.Yong, V.C.Wimmer, N.A.Veldhuis, L.M.Challis, M.Haidar, S.Petrou, R.A.D.Bathgate, M.D.W.Griffin. A Novel Ultra-Stable, Monomeric Green Fluorescent Protein For Direct Volumetric Imaging of Whole Organs Using Clarity. Sci Rep V. 8 667 2018.
ISSN: ESSN 2045-2322
PubMed: 29330459
DOI: 10.1038/S41598-017-18045-Y
Page generated: Fri Jul 26 10:19:52 2024

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