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Chlorine in PDB 5kb5: Crystal Structure of the Adenosine Kinase From Mus Musculus in Complex with Adenosine and Adenosine-Diphosphate

Enzymatic activity of Crystal Structure of the Adenosine Kinase From Mus Musculus in Complex with Adenosine and Adenosine-Diphosphate

All present enzymatic activity of Crystal Structure of the Adenosine Kinase From Mus Musculus in Complex with Adenosine and Adenosine-Diphosphate:
2.7.1.20;

Protein crystallography data

The structure of Crystal Structure of the Adenosine Kinase From Mus Musculus in Complex with Adenosine and Adenosine-Diphosphate, PDB code: 5kb5 was solved by R.R.Oliveira, R.M.Neto, C.C.Polo, C.C.C.Tonoli, M.T.Murakami, K.G.Franchini, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.63 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.264, 73.559, 84.330, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 20

Other elements in 5kb5:

The structure of Crystal Structure of the Adenosine Kinase From Mus Musculus in Complex with Adenosine and Adenosine-Diphosphate also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Potassium (K) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Adenosine Kinase From Mus Musculus in Complex with Adenosine and Adenosine-Diphosphate (pdb code 5kb5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Adenosine Kinase From Mus Musculus in Complex with Adenosine and Adenosine-Diphosphate, PDB code: 5kb5:

Chlorine binding site 1 out of 1 in 5kb5

Go back to Chlorine Binding Sites List in 5kb5
Chlorine binding site 1 out of 1 in the Crystal Structure of the Adenosine Kinase From Mus Musculus in Complex with Adenosine and Adenosine-Diphosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Adenosine Kinase From Mus Musculus in Complex with Adenosine and Adenosine-Diphosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:13.3
occ:1.00
 OG1 A:THR82 3.1 13.3 1.0
O A:HOH520 3.2 13.6 1.0
N A:ASN30 3.3 13.4 1.0
N A:THR82 3.4 13.1 1.0
C2 A:ADN401 3.6 13.2 1.0
CB A:THR82 3.7 13.2 1.0
CA A:GLY29 3.7 13.2 1.0
CB A:ALA184 3.8 13.4 1.0
N A:SER81 3.9 13.8 1.0
CB A:SER81 4.0 14.3 1.0
C A:GLY29 4.0 13.6 1.0
CB A:ASN30 4.1 14.1 1.0
CA A:THR82 4.2 12.8 1.0
CB A:PHE186 4.2 13.5 1.0
N3 A:ADN401 4.2 12.8 1.0
CA A:ASN30 4.2 13.9 1.0
CA A:SER81 4.3 13.7 1.0
C A:SER81 4.3 13.0 1.0
O A:ASN30 4.3 13.4 1.0
N1 A:ADN401 4.4 13.6 1.0
CG A:ASN30 4.4 14.6 1.0
OD1 A:ASN30 4.5 15.6 1.0
CD2 A:PHE186 4.7 13.3 1.0
C A:ASN30 4.7 13.7 1.0
C A:GLY80 4.7 14.2 1.0
N A:PHE187 4.7 13.7 1.0
CB A:PHE187 4.9 14.0 1.0
CA A:ALA184 4.9 13.4 1.0
O A:MET28 4.9 13.7 1.0
O A:ALA184 4.9 14.0 1.0
N A:GLY29 4.9 13.3 1.0
CG A:PHE186 5.0 13.5 1.0
N A:ALA184 5.0 13.6 1.0

Reference:

R.R.Oliveira, R.M.Neto, C.C.Polo, C.C.C.Tonoli, M.T.Murakami, K.G.Franchini. Crystal Structure of the Adenosine Kinase From Mus Musculus in Complex with Adenosine and Adenosine-Diphosphate To Be Published.
Page generated: Fri Jul 26 10:35:48 2024

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