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Chlorine in PDB 5kcn: Crystal Structure of Full-Length Lpoa From Haemophilus Influenzae at 1.97 Angstrom Resolution

Protein crystallography data

The structure of Crystal Structure of Full-Length Lpoa From Haemophilus Influenzae at 1.97 Angstrom Resolution, PDB code: 5kcn was solved by K.Sathiyamoorthy, M.A.Saper, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.78 / 1.97
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 65.866, 68.427, 128.404, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 21.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Full-Length Lpoa From Haemophilus Influenzae at 1.97 Angstrom Resolution (pdb code 5kcn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Full-Length Lpoa From Haemophilus Influenzae at 1.97 Angstrom Resolution, PDB code: 5kcn:

Chlorine binding site 1 out of 1 in 5kcn

Go back to Chlorine Binding Sites List in 5kcn
Chlorine binding site 1 out of 1 in the Crystal Structure of Full-Length Lpoa From Haemophilus Influenzae at 1.97 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Full-Length Lpoa From Haemophilus Influenzae at 1.97 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:29.8
occ:1.00
HG1 A:THR296 2.2 36.2 1.0
HD22 A:ASN324 2.4 35.2 1.0
H A:LEU320 2.4 29.3 1.0
H A:LEU321 2.4 31.5 1.0
HD3 A:PRO264 2.9 38.7 1.0
HB2 A:PRO319 2.9 30.5 1.0
HG21 A:THR296 3.0 32.1 1.0
HG A:LEU321 3.0 47.7 1.0
OG1 A:THR296 3.0 30.2 1.0
ND2 A:ASN324 3.2 29.4 1.0
N A:LEU320 3.2 24.4 1.0
HB3 A:LEU320 3.3 33.7 1.0
N A:LEU321 3.3 26.2 1.0
HB2 A:LEU321 3.4 39.7 1.0
HD12 A:LEU321 3.6 52.7 1.0
HD21 A:ASN324 3.6 35.2 1.0
CB A:PRO319 3.6 25.4 1.0
HB2 A:ASN324 3.6 29.1 1.0
HB3 A:PRO319 3.6 30.5 1.0
CG2 A:THR296 3.7 26.8 1.0
CG A:LEU321 3.7 39.7 1.0
CB A:THR296 3.8 29.1 1.0
CD A:PRO264 3.8 32.2 1.0
HB A:THR296 3.8 34.9 1.0
HA A:PRO319 3.9 29.6 1.0
CB A:LEU321 3.9 33.0 1.0
CA A:LEU320 3.9 26.8 1.0
HA A:LEU263 3.9 34.0 1.0
CB A:LEU320 4.0 28.1 1.0
HG23 A:THR296 4.0 32.1 1.0
CA A:PRO319 4.1 24.7 1.0
C A:PRO319 4.1 23.8 1.0
C A:LEU320 4.1 27.0 1.0
CD1 A:LEU321 4.1 43.9 1.0
CG A:ASN324 4.1 27.8 1.0
HB3 A:ASN324 4.1 29.1 1.0
HG3 A:PRO264 4.2 45.0 1.0
CB A:ASN324 4.2 24.2 1.0
HB3 A:PRO264 4.2 44.0 1.0
CA A:LEU321 4.2 27.9 1.0
N A:PRO264 4.3 30.6 1.0
HB2 A:LEU320 4.3 33.7 1.0
HD11 A:LEU321 4.4 52.7 1.0
HD2 A:PRO264 4.4 38.7 1.0
CG A:PRO264 4.4 37.5 1.0
HG22 A:THR296 4.5 32.1 1.0
O A:LEU262 4.6 27.1 1.0
C A:LEU263 4.6 30.4 1.0
CA A:LEU263 4.6 28.3 1.0
CB A:PRO264 4.7 36.6 1.0
HB3 A:LEU262 4.8 27.7 1.0
HG11 A:VAL301 4.8 50.5 1.0
HB3 A:LEU321 4.8 39.7 1.0
HA A:LEU320 4.8 32.2 1.0
HA A:LEU321 4.9 33.5 1.0
CG A:PRO319 4.9 23.3 1.0
O A:LEU321 4.9 26.1 1.0
HD13 A:LEU321 5.0 52.7 1.0
C A:LEU262 5.0 26.8 1.0
N A:LEU263 5.0 26.5 1.0

Reference:

K.Sathiyamoorthy, J.Vijayalakshmi, B.Tirupati, L.Fan, M.A.Saper. Structural Analyses of the Haemophilus Influenzae Peptidoglycan Synthase Activator Lpoa Suggest Multiple Conformations in Solution. J. Biol. Chem. V. 292 17626 2017.
ISSN: ESSN 1083-351X
PubMed: 28887305
DOI: 10.1074/JBC.M117.804997
Page generated: Sat Jul 12 04:01:45 2025

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