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Chlorine in PDB 5kha: Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp)

Enzymatic activity of Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp)

All present enzymatic activity of Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp):
6.3.1.5; 6.3.5.1;

Protein crystallography data

The structure of Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp), PDB code: 5kha was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.24 / 2.10
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 71.880, 123.750, 73.650, 90.00, 110.93, 90.00
R / Rfree (%) 16.5 / 21

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp) (pdb code 5kha). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp), PDB code: 5kha:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5kha

Go back to Chlorine Binding Sites List in 5kha
Chlorine binding site 1 out of 2 in the Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl602

b:53.8
occ:1.00
OG A:SER173 3.2 13.7 1.0
NZ A:LYS179 3.2 24.2 1.0
O A:HOH748 3.5 27.0 1.0
CB A:SER173 3.8 14.2 1.0
CE A:LYS179 3.8 19.9 1.0
O A:HOH729 3.8 18.3 1.0
CA A:SER173 4.1 15.4 1.0
SG A:CYS147 4.2 27.4 1.0
CZ A:PHE120 4.3 25.6 1.0
CD A:PRO174 4.3 17.8 1.0
NE1 A:TRP151 4.5 27.4 1.0
C A:SER173 4.9 13.8 1.0
N A:PRO174 4.9 17.9 1.0
CE2 A:PHE120 4.9 19.9 1.0

Chlorine binding site 2 out of 2 in 5kha

Go back to Chlorine Binding Sites List in 5kha
Chlorine binding site 2 out of 2 in the Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl602

b:47.5
occ:1.00
NZ B:LYS179 3.0 26.5 1.0
O B:HOH818 3.2 39.1 1.0
OG B:SER173 3.2 17.8 1.0
CE B:LYS179 3.6 23.7 1.0
CB B:SER173 3.9 24.7 1.0
CZ B:PHE120 4.2 21.1 1.0
CA B:SER173 4.2 20.8 1.0
O B:HOH723 4.2 28.1 1.0
CD B:PRO174 4.3 20.2 1.0
SG B:CYS147 4.5 30.2 1.0
CE2 B:PHE120 4.7 22.8 1.0
NE1 B:TRP151 4.9 36.9 1.0
N B:PRO174 4.9 22.0 1.0
C B:SER173 4.9 18.6 1.0

Reference:

J.Abendroth, S.L.Delker, D.D.Lorimer, T.E.Edwards. Structure of Glutamine-Dependent Nad+ Synthetase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp) To Be Published.
Page generated: Fri Jul 26 10:41:40 2024

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