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Chlorine in PDB 5kk0: Synechocystis Aco Mutant - T136A

Enzymatic activity of Synechocystis Aco Mutant - T136A

All present enzymatic activity of Synechocystis Aco Mutant - T136A:
1.13.11.75;

Protein crystallography data

The structure of Synechocystis Aco Mutant - T136A, PDB code: 5kk0 was solved by X.Sui, P.D.Kiser, K.Palczewski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.61 / 2.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 118.760, 124.961, 203.911, 90.00, 90.00, 90.00
R / Rfree (%) 22.5 / 26.4

Other elements in 5kk0:

The structure of Synechocystis Aco Mutant - T136A also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Synechocystis Aco Mutant - T136A (pdb code 5kk0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Synechocystis Aco Mutant - T136A, PDB code: 5kk0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 5kk0

Go back to Chlorine Binding Sites List in 5kk0
Chlorine binding site 1 out of 2 in the Synechocystis Aco Mutant - T136A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Synechocystis Aco Mutant - T136A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:48.0
occ:1.00
N C:ASP32 3.1 52.2 1.0
ND2 A:ASN341 3.2 68.7 1.0
O C:ASP32 3.3 55.0 1.0
ND2 A:ASN338 3.4 53.5 1.0
CA C:TRP31 3.7 46.5 1.0
C C:ASP32 3.8 54.8 1.0
CE3 C:TRP31 3.8 44.8 1.0
CB A:ASN338 3.9 47.1 1.0
C C:TRP31 3.9 48.8 1.0
CD2 C:TYR33 4.0 55.9 1.0
CA C:ASP32 4.0 54.1 1.0
CG A:ASN338 4.2 47.2 1.0
CB C:TRP31 4.2 43.9 1.0
CG A:ASN341 4.2 64.8 1.0
OD1 A:ASN341 4.4 69.7 1.0
CD2 C:TRP31 4.5 43.5 1.0
CB C:TYR33 4.5 49.1 1.0
O C:GLU30 4.5 47.3 1.0
CB C:ASP32 4.6 56.6 1.0
CZ3 C:TRP31 4.6 44.3 1.0
CG C:TRP31 4.7 43.4 1.0
N C:TYR33 4.7 51.2 1.0
CG C:TYR33 4.7 49.2 1.0
CE2 C:TYR33 4.9 58.4 1.0
N C:TRP31 4.9 46.9 1.0

Chlorine binding site 2 out of 2 in 5kk0

Go back to Chlorine Binding Sites List in 5kk0
Chlorine binding site 2 out of 2 in the Synechocystis Aco Mutant - T136A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Synechocystis Aco Mutant - T136A within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl501

b:63.4
occ:1.00
N D:ASP32 3.2 64.3 1.0
ND2 B:ASN338 3.2 52.5 1.0
O D:ASP32 3.3 67.9 1.0
ND2 B:ASN341 3.6 51.7 1.0
CA D:TRP31 3.7 50.7 1.0
CE3 D:TRP31 3.8 44.2 1.0
CB B:ASN338 3.9 52.5 1.0
C D:TRP31 3.9 55.4 1.0
C D:ASP32 3.9 64.4 1.0
CG B:ASN338 4.0 53.0 1.0
CA D:ASP32 4.1 64.9 1.0
CB D:TRP31 4.1 48.5 1.0
CD2 D:TYR33 4.3 68.3 1.0
O D:GLU30 4.3 48.0 1.0
CD2 D:TRP31 4.4 43.8 1.0
CZ3 D:TRP31 4.6 46.0 1.0
CG D:TRP31 4.6 45.4 1.0
CG B:ASN341 4.6 57.6 1.0
CB D:ASP32 4.7 65.8 1.0
CB D:TYR33 4.8 67.1 1.0
OD1 B:ASN341 4.8 64.3 1.0
N D:TRP31 4.8 50.0 1.0
N D:TYR33 4.9 63.1 1.0

Reference:

X.Sui, M.Golczak, J.Zhang, K.A.Kleinberg, J.Von Lintig, K.Palczewski, P.D.Kiser. Utilization of Dioxygen By Carotenoid Cleavage Oxygenases. J.Biol.Chem. V. 290 30212 2015.
ISSN: ESSN 1083-351X
PubMed: 26499794
DOI: 10.1074/JBC.M115.696799
Page generated: Sat Dec 12 11:56:41 2020

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