Chlorine in PDB 5kor: Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide

All present enzymatic activity of Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide:
2.4.1.69;

The structure of Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide, PDB code: 5kor was solved by J.Rocha, D.De Sanctis, C.Breton, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.68 / 2.20
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	87.975, 85.806, 150.723, 90.00, 96.19, 90.00
R / Rfree (%)	17.9 / 21.5

The binding sites of Chlorine atom in the Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide (pdb code 5kor). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide, PDB code: 5kor:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl613 b:57.7 occ:1.00 O B:HOH756 3.3 37.6 1.0 O B:HOH849 3.5 56.7 1.0 N B:GLN376 3.7 39.9 1.0 CA B:PHE375 3.9 40.6 1.0 O B:PRO374 4.2 44.7 1.0 C B:PHE375 4.4 39.9 1.0 CD1 B:PHE375 4.4 43.5 1.0 CB B:PHE375 4.4 39.9 1.0 CB B:GLN376 4.4 42.4 1.0 CA B:GLN376 4.7 38.7 1.0 CG B:PHE375 4.9 40.6 1.0

Chlorine binding site 2 out of 3 in the Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl617 b:51.5 occ:1.00 O C:HOH735 3.5 40.2 1.0 O1 C:EDO616 3.6 65.6 1.0 N C:GLN376 3.7 34.8 1.0 CA C:PHE375 4.2 36.3 1.0 CB C:GLN376 4.3 37.6 1.0 O C:PRO374 4.4 42.4 1.0 C C:PHE375 4.5 35.1 1.0 CD1 C:PHE375 4.6 37.0 1.0 CA C:GLN376 4.6 36.5 1.0 C1 C:EDO616 4.8 64.7 1.0 CB C:PHE375 4.9 34.0 1.0

Chlorine binding site 3 out of 3 in the Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Arabidopsis Thaliana Fucosyltransferase 1 (FUT1) in Complex with Gdp and A Xylo-Oligossacharide within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl605 b:58.8 occ:1.00 O D:HOH834 2.8 55.9 1.0 N D:GLN376 3.8 44.5 1.0 CA D:PHE375 4.0 44.5 1.0 O D:PRO374 4.1 49.0 1.0 CD1 D:PHE375 4.3 45.2 1.0 C D:PHE375 4.5 44.9 1.0 CB D:GLN376 4.5 47.7 1.0 CB D:PHE375 4.6 43.0 1.0 CA D:GLN376 4.8 44.2 1.0 CG D:PHE375 4.9 42.9 1.0

J.Rocha, F.Ciceron, D.De Sanctis, M.Lelimousin, V.Chazalet, O.Lerouxel, C.Breton. Structure of Arabidopsis Thaliana FUT1 Reveals A Variant of the Gt-B Class Fold and Provides Insight Into Xyloglucan Fucosylation. Plant Cell V. 28 2352 2016.
ISSN: ESSN 1532-298X
PubMed: 27637560
DOI: 10.1105/TPC.16.00519