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Chlorine in PDB 5kqt: Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins For New Chemistries

Enzymatic activity of Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins For New Chemistries

All present enzymatic activity of Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins For New Chemistries:
2.6.1.18;

Protein crystallography data

The structure of Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins For New Chemistries, PDB code: 5kqt was solved by M.Wilding, J.Newman, T.S.Peat, C.Scott, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.80 / 1.99
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 66.346, 66.346, 343.314, 90.00, 90.00, 120.00
R / Rfree (%) 19.6 / 23.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins For New Chemistries (pdb code 5kqt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins For New Chemistries, PDB code: 5kqt:

Chlorine binding site 1 out of 1 in 5kqt

Go back to Chlorine Binding Sites List in 5kqt
Chlorine binding site 1 out of 1 in the Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins For New Chemistries


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins For New Chemistries within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:39.6
occ:1.00
 O A:HOH698 3.3 22.9 1.0
N A:ALA350 3.4 23.6 1.0
CA A:ASN347 3.5 29.3 1.0
C A:ASN347 3.6 28.0 1.0
CB A:THR349 3.8 22.5 1.0
CB A:ASN347 3.8 31.1 1.0
O A:ASN347 3.8 26.1 1.0
CB A:ALA350 3.9 25.3 1.0
N A:THR349 4.0 22.3 1.0
ND2 A:ASN347 4.1 35.6 1.0
CA A:THR349 4.2 22.4 1.0
CA A:ALA350 4.2 25.1 1.0
C A:THR349 4.2 23.4 1.0
N A:ILE348 4.3 25.0 1.0
CG A:ASN347 4.5 34.1 1.0
O A:HOH778 4.5 37.5 1.0
OG1 A:THR349 4.6 22.7 1.0
CG2 A:THR349 4.7 22.5 1.0
N A:ASN347 4.8 27.4 1.0
C A:ILE348 4.9 22.8 1.0

Reference:

M.Wilding, T.S.Peat, S.Kalyaanamoorthy, J.Newman, C.Scott, L.S.Jermiin. Reverse Engineering: Transaminase Biocatalyst Development Using Ancestral Sequence Reconstruction Green Chemistry V. 19 5375 2017.
DOI: 10.1039/C7GC02343J
Page generated: Fri Jul 26 10:49:11 2024

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